C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: carnitine palmitoyltransferase 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028607 Cpt2 10090 - 4:107903981-107923610 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030345 Cpt2-001 107903981-107923610 protein_coding
  ENSMUST00000106719 Cpt2-004 107907631-107923545 protein_coding
  ENSMUST00000106720 Cpt2-003 107903983-107923560 protein_coding
  ENSMUST00000131644 Cpt2-002 107908220-107923588 protein_coding
  ENSMUST00000141738 Cpt2-005 107907865-107923447 processed_transcript
  ENSMUST00000175651 Cpt2-006 107907718-107912766 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030345ENSMUST00000106719ENSMUST00000106720ENSMUST00000131644ENSMUST00000175651
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030345 47.669±19.03 70.546±6.19 17.898±1.15 4.467±0.41 37.841±14.37 23.338±8.17 60.181±10.32 38.668±6.70 28.013±10.36 6.843±1.50 21.172±1.21 20.634±10.43 14.646±14.93 15.373±7.28
ENSMUST00000106719 N/A 68.286±16.61 N/A 0.546±0.00 N/A N/A N/A N/A N/A N/A N/A 9.134±0.00 6.560±0.37 3.171±0.00
ENSMUST00000106720 N/A 113.603±20.11 N/A N/A 49.497±16.08 21.630±3.13 N/A N/A 19.591±2.81 6.765±1.63 N/A 31.863±15.91 7.148±1.03 N/A
ENSMUST00000131644 N/A 99.672±0.00 N/A N/A N/A 77.435±2.27 N/A N/A N/A N/A N/A 134.927±10.83 N/A N/A
ENSMUST00000175651 N/A N/A N/A 0.915±0.00 N/A N/A N/A N/A N/A N/A N/A 18.356±8.42 6.327±3.36 1.235±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00083F CIL_00083F_0002 VISTA 4:107302048-107904613

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004095 IEA carnitine O-palmitoyltransferase activity
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0005739 IDA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0006631 IEA fatty acid metabolic process
GO:0006810 IEA transport
GO:0008152 IEA metabolic process
GO:0016746 IEA transferase activity, transferring acyl groups

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038618 cpt2 carnitine palmitoyltransferase II protein_coding Danio_rerio
ENSG00000157184 CPT2 carnitine palmitoyltransferase 2 protein_coding Homo_sapiens

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