C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: proline-rich nuclear receptor coactivator 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028675 Pnrc2 10090 - 4:135870918-135873850 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030436 Pnrc2-001 135870918-135873850 protein_coding
  ENSMUST00000142585 Pnrc2-002 135872324-135873570 protein_coding
  ENSMUST00000180300 Pnrc2-003 135872451-135873061 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030436ENSMUST00000142585ENSMUST00000180300
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030436 18.985±3.51 16.409±5.08 34.501±5.05 21.442±9.74 14.104±7.16 19.972±3.67 9.703±1.31 15.953±2.12 22.849±14.11 18.841±2.01 13.036±0.87 22.549±12.38 36.260±6.98 5.028±1.14
ENSMUST00000142585 N/A N/A N/A 12.399±0.00 N/A N/A N/A N/A N/A N/A N/A 57.294±0.00 48.346±7.93 17.513±0.00
ENSMUST00000180300 N/A N/A N/A 257.261±0.00 N/A N/A N/A N/A N/A N/A N/A 1026.270±0.00 851.831±0.00 197.203±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000207 CIL_000207_0002 CGP 4:135870918-135920207

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000184 ISS nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000932 ISS cytoplasmic mRNA processing body
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000053291 pnrc2 proline-rich nuclear receptor coactivator 2 protein_coding Danio_rerio
ENSG00000189266 PNRC2 proline-rich nuclear receptor coactivator 2 protein_coding Homo_sapiens

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