C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proline-rich nuclear receptor coactivator 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030436 Pnrc2-001 ENSMUSG00000028675 10090 - 4:135870918-135873850 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030436
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030436 18.985±3.51 16.409±5.08 34.501±5.05 21.442±9.74 14.104±7.16 19.972±3.67 9.703±1.31 15.953±2.12 22.849±14.11 18.841±2.01 13.036±0.87 22.549±12.38 36.260±6.98 5.028±1.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000207 CIL_000207_0002 CGP 4:135870918-135920207

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000184 ISS nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000932 ISS cytoplasmic mRNA processing body
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000334351 PNRC2-001 protein_coding Homo_sapiens 0 824
ENST00000374468 PNRC2-002 protein_coding Homo_sapiens 0 804
ENST00000423940 AL390877.1-001 processed_pseudogene Homo_sapiens 0 446
ENST00000471915 PNRC2-003 protein_coding Homo_sapiens 0 311

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