C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NIPA-like domain containing 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028803 Nipal3 10090 - 4:135445420-135495038 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000102549 Nipal3-001 135448892-135494623 protein_coding
  ENSMUST00000105856 Nipal3-002 135446137-135494506 protein_coding
  ENSMUST00000140982 Nipal3-006 135451886-135474454 protein_coding
  ENSMUST00000145020 Nipal3-005 135479560-135494969 protein_coding
  ENSMUST00000146617 Nipal3-004 135482477-135495038 protein_coding
  ENSMUST00000148023 Nipal3-007 135452267-135455335 processed_transcript
  ENSMUST00000183397 Nipal3-008 135452177-135455063 processed_transcript
  ENSMUST00000183807 Nipal3-003 135445420-135494506 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000102549ENSMUST00000140982ENSMUST00000183807
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000102549 3.141±1.88 N/A 13.654±1.73 8.043±4.35 2.875±1.28 6.813±4.67 3.323±0.58 5.989±3.06 1.466±0.73 12.555±6.44 2.103±0.43 3.074±1.19 1.244±0.25
ENSMUST00000140982 3.650±1.28 4.379±0.93 N/A N/A 5.149±1.40 14.284±3.02 6.051±0.92 7.586±0.53 2.080±0.27 15.415±3.70 1.883±0.15 7.587±1.64 2.098±0.71
ENSMUST00000183807 N/A 2.823±0.23 N/A N/A N/A 7.206±0.00 2.608±0.11 N/A 0.922±0.28 6.011±0.00 N/A 3.923±1.27 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZX CIL_0007ZX_0002 VISTA 4:134905845-135507207
CIL_0007CU CIL_0007CU_0002 CGP 4:135412308-135495038

Gene Ontology
GO IDEvidence TypeGO Description
GO:0015095 IEA magnesium ion transmembrane transporter activity
GO:0015693 IEA magnesium ion transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000021147 nipal3 NIPA-like domain containing 3 protein_coding Danio_rerio
ENSG00000001461 NIPAL3 NIPA-like domain containing 3 protein_coding Homo_sapiens

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