C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0007CU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000032623-ENSDARG00000021147 CGP 7955 17:26721415-26777029
GeneTranscriptPositionBiotype
ENSDARG00000021147 (nipal3)
NIPA-like domain containing 3
ENSDART00000139946 (nipal3-001) 26770108-26777029 protein_coding
ENSDARG00000032623 (rcan3)
regulator of calcineurin family member 3
ENSDART00000045842 (rcan3-002) 26722904-26753542 protein_coding
ENSDART00000050202 (rcan3-001) 26721415-26768267 protein_coding
CIL_0007CU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000059713-ENSMUSG00000028803 CGP 10090 4:135412308-135495038
GeneTranscriptPositionBiotype
ENSMUSG00000028801 (Stpg1)
sperm tail PG rich repeat containing 1
ENSMUST00000063707 (Stpg1-001) 135495987-135537803 protein_coding
ENSMUST00000123221 (Stpg1-002) 135495977-135533990 processed_transcript
ENSMUST00000153891 (Stpg1-003) 135494790-135519349 processed_transcript
ENSMUSG00000028803 (Nipal3)
NIPA-like domain containing 3
ENSMUST00000102549 (Nipal3-001) 135448892-135494623 protein_coding
ENSMUST00000105856 (Nipal3-002) 135446137-135494506 protein_coding
ENSMUST00000140982 (Nipal3-006) 135451886-135474454 protein_coding
ENSMUST00000145020 (Nipal3-005) 135479560-135494969 protein_coding
ENSMUST00000146617 (Nipal3-004) 135482477-135495038 protein_coding
ENSMUST00000148023 (Nipal3-007) 135452267-135455335 processed_transcript
ENSMUST00000183397 (Nipal3-008) 135452177-135455063 processed_transcript
ENSMUST00000183807 (Nipal3-003) 135445420-135494506 nonsense_mediated_decay
ENSMUSG00000059713 (Rcan3)
regulator of calcineurin 3
ENSMUST00000030606 (Rcan3-001) 135412308-135433853 protein_coding
ENSMUST00000132654 (Rcan3-003) 135412308-135425267 protein_coding
ENSMUST00000156635 (Rcan3-002) 135418443-135433823 protein_coding
ENSMUSG00000087016 (Gm15979)
predicted gene 15979
ENSMUST00000149741 (Gm15979-001) 135430126-135430841 sense_intronic

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007CU_0001ENSDARG00000021147ENSDART00000139946ENSDARG00000032623ENSDART00000045842ENSDART00000050202CIL_0007CU_0002ENSMUSG00000028801ENSMUST00000063707ENSMUST00000123221ENSMUST00000153891ENSMUSG00000028803ENSMUST00000102549ENSMUST00000105856ENSMUST00000140982ENSMUST00000145020ENSMUST00000146617ENSMUST00000148023ENSMUST00000183397ENSMUST00000183807ENSMUSG00000059713ENSMUST00000030606ENSMUST00000132654ENSMUST00000156635ENSMUSG00000087016ENSMUST00000149741
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007CU_0001ENSDARG00000021147ENSDART00000139946ENSDARG00000032623ENSDART00000045842ENSDART00000050202CIL_0007CU_0002ENSMUSG00000028801ENSMUST00000063707ENSMUST00000123221ENSMUSG00000028803ENSMUST00000102549ENSMUST00000140982ENSMUST00000183807ENSMUSG00000059713ENSMUST00000030606ENSMUSG00000087016ENSMUST00000149741
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000021147 ENSDART00000139946 N/A N/A N/A 8.471±1.79 N/A N/A 16.290±3.88 9.408±2.59 1.546±0.00 N/A 3.307±0.00 N/A N/A N/A
ENSDARG00000032623 ENSDART00000045842 N/A N/A N/A N/A N/A N/A 3.293±0.93 0.498±0.17 0.035±0.00 N/A 1.023±0.00 N/A N/A N/A
ENSDART00000050202 N/A N/A N/A 25.545±0.00 N/A N/A 8.225±1.85 0.766±0.48 0.121±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028801 ENSMUST00000063707 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 39.090±18.71
ENSMUST00000123221 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.494±0.00
ENSMUST00000153891 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000028803 ENSMUST00000102549 3.141±1.88 N/A 13.654±1.73 8.043±4.35 2.875±1.28 6.813±4.67 3.323±0.58 5.989±3.06 1.466±0.73 12.555±6.44 2.103±0.43 3.074±1.19 1.244±0.25 N/A
ENSMUST00000105856 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140982 3.650±1.28 4.379±0.93 N/A N/A 5.149±1.40 14.284±3.02 6.051±0.92 7.586±0.53 2.080±0.27 15.415±3.70 1.883±0.15 7.587±1.64 2.098±0.71 N/A
ENSMUST00000145020 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146617 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183397 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183807 N/A 2.823±0.23 N/A N/A N/A 7.206±0.00 2.608±0.11 N/A 0.922±0.28 6.011±0.00 N/A 3.923±1.27 N/A N/A
ENSMUSG00000059713 ENSMUST00000030606 5.475±1.91 6.125±1.55 7.999±0.19 8.523±3.92 6.040±1.26 8.104±2.61 1.807±0.63 4.157±1.51 1.075±0.50 6.295±0.65 0.866±0.35 5.614±2.23 4.513±2.02 0.855±0.26
ENSMUST00000132654 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156635 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000087016 ENSMUST00000149741 0.080±0.00 0.161±0.01 0.037±0.02 0.049±0.03 N/A 0.378±0.09 0.168±0.00 0.083±0.00 N/A 0.160±0.07 N/A 0.401±0.31 0.179±0.22 0.165±0.00

Loading