C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane protein 57
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028826 Tmem57 10090 - 4:134802759-134853345 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030628 Tmem57-001 134802759-134853345 protein_coding
  ENSMUST00000136113 Tmem57-002 134837260-134853317 retained_intron
  ENSMUST00000137707 Tmem57-004 134811194-134853149 nonsense_mediated_decay
  ENSMUST00000148595 Tmem57-003 134828388-134853263 nonsense_mediated_decay
  ENSMUST00000150031 Tmem57-005 134802759-134811213 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030628ENSMUST00000136113ENSMUST00000137707ENSMUST00000150031
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030628 6.491±0.39 3.720±1.14 14.974±0.48 13.849±2.00 5.373±0.87 5.585±1.00 2.721±0.18 5.985±0.39 5.659±1.16 6.162±0.58 5.948±1.55 6.941±3.34 11.663±3.06 9.189±3.05
ENSMUST00000136113 N/A 14.317±8.53 N/A N/A 8.146±0.48 8.066±0.00 N/A N/A N/A N/A N/A 13.216±2.21 N/A N/A
ENSMUST00000137707 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.957±0.30 N/A
ENSMUST00000150031 0.790±0.00 N/A N/A 4.247±1.66 0.835±0.00 N/A 0.431±0.06 N/A 1.160±0.22 0.646±0.00 1.170±0.36 N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IDA nucleus
GO:0007420 IEP brain development
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0030424 IDA axon
GO:0031965 IDA nuclear membrane
GO:0043005 IDA neuron projection
GO:0044306 IDA neuron projection terminus
GO:0045202 IDA synapse

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005625 tmem57a transmembrane protein 57a protein_coding Danio_rerio
ENSDARG00000012741 tmem57b transmembrane protein 57b protein_coding Danio_rerio
ENSG00000204178 TMEM57 transmembrane protein 57 protein_coding Homo_sapiens

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