C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane protein 57
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000204178 TMEM57 9606 + 1:25430858-25500209 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000374343 TMEM57-001 25430920-25500209 protein_coding
  ENST00000399766 TMEM57-201 25430858-25500205 protein_coding
  ENST00000470035 TMEM57-002 25448893-25458783 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000374343ENST00000399766
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000374343 6.211±0.00 5.647±0.00 2.088±0.00 4.561±1.39 3.912±0.84 3.255±1.57 2.442±1.30 6.665±0.84 8.296±4.94 3.425±0.23 12.664±10.57 6.472±1.20 4.918±0.22 17.166±0.00
ENST00000399766 N/A N/A N/A N/A N/A 0.806±0.00 N/A N/A N/A N/A 0.724±0.00 9.066±0.00 9.144±0.00 16.904±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003Q4 CIL_0003Q4_0002 CGP 1:25362249-25500209
CIL_0003Q1 CIL_0003Q1_0003 CGP 1:25430858-25568886

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 ISS nucleus
GO:0007420 IEA brain development
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0030424 IEA axon
GO:0031965 ISS nuclear membrane
GO:0043005 IEA neuron projection
GO:0044306 ISS neuron projection terminus
GO:0045202 ISS synapse

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005625 tmem57a transmembrane protein 57a protein_coding Danio_rerio
ENSDARG00000012741 tmem57b transmembrane protein 57b protein_coding Danio_rerio
ENSMUSG00000028826 Tmem57 transmembrane protein 57 protein_coding Mus_musculus

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