C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: glucocorticoid modulatory element binding protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028901 Gmeb1 10090 - 4:132221025-132261602 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030733 Gmeb1-002 132225019-132251852 protein_coding
  ENSMUST00000105964 Gmeb1-003 132225671-132261602 protein_coding
  ENSMUST00000105965 Gmeb1-001 132222946-132261521 protein_coding
  ENSMUST00000125534 Gmeb1-004 132236693-132246068 retained_intron
  ENSMUST00000126542 Gmeb1-005 132251764-132254252 processed_transcript
  ENSMUST00000131763 Gmeb1-006 132231516-132234906 retained_intron
  ENSMUST00000168553 Gmeb1-201 132221025-132252494 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030733ENSMUST00000105964ENSMUST00000105965ENSMUST00000168553
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030733 N/A 4.017±1.42 N/A 1.057±0.00 2.088±0.22 3.497±1.98 0.514±0.00 0.627±0.00 0.538±0.00 N/A N/A 2.450±0.42 1.266±0.00 N/A
ENSMUST00000105964 4.324±1.51 3.472±1.99 2.308±0.06 7.114±0.19 4.748±1.29 3.697±1.17 2.122±0.50 3.360±0.58 3.662±2.27 5.810±0.64 1.131±0.13 7.484±1.93 7.351±4.47 6.423±0.74
ENSMUST00000105965 1.970±0.77 0.861±0.21 1.680±0.03 2.703±1.35 1.451±0.49 1.162±0.24 0.757±0.12 1.215±0.21 1.087±0.43 2.447±0.43 1.301±0.27 2.103±0.60 0.866±0.32 0.956±0.10
ENSMUST00000168553 N/A 0.644±0.09 0.378±0.02 0.882±0.51 N/A N/A 0.166±0.00 0.272±0.03 0.922±0.50 N/A 0.362±0.00 0.782±0.18 0.706±0.35 0.448±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099N CIL_00099N_0002 VISTA 4:131775516-132379227

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0003713 IEA transcription coactivator activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062060 gmeb1 glucocorticoid modulatory element binding protein 1 protein_coding Danio_rerio
ENSG00000162419 GMEB1 glucocorticoid modulatory element binding protein 1 protein_coding Homo_sapiens

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