C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glucocorticoid modulatory element binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030733 Gmeb1-002 ENSMUSG00000028901 10090 - 4:132225019-132251852 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverOvaryPlacentaENSMUST00000030733
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Ovary Placenta
ENSMUST00000030733 4.017±1.42 1.057±0.00 2.088±0.22 3.497±1.98 0.514±0.00 0.627±0.00 0.538±0.00 2.450±0.42 1.266±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099N CIL_00099N_0002 VISTA 4:131775516-132379227

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0003713 IEA transcription coactivator activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000266068 GMEB2-001 protein_coding Homo_sapiens 1.4013e-45 189
ENST00000294409 GMEB1-003 protein_coding Homo_sapiens 0 2030
ENST00000361872 GMEB1-002 protein_coding Homo_sapiens 0 2283
ENST00000370069 GMEB2-002 protein_coding Homo_sapiens 1.4013e-45 189
ENST00000370077 GMEB2-003 protein_coding Homo_sapiens 1.4013e-45 189
ENST00000373816 GMEB1-001 protein_coding Homo_sapiens 0 2366
ENST00000480454 GMEB1-005 processed_transcript Homo_sapiens 0 2102

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