C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Rho guanine nucleotide exchange factor (GEF) 19
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028919 Arhgef19 10090 + 4:141239499-141257564 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000006618 Arhgef19-001 141242869-141257564 protein_coding
  ENSMUST00000125392 Arhgef19-006 141242893-141247001 protein_coding
  ENSMUST00000135623 Arhgef19-005 141245425-141247444 protein_coding
  ENSMUST00000138096 Arhgef19-004 141242855-141246356 protein_coding
  ENSMUST00000140536 Arhgef19-003 141239650-141247490 retained_intron
  ENSMUST00000141834 Arhgef19-002 141239499-141246412 protein_coding
  ENSMUST00000147903 Arhgef19-007 141246396-141248109 protein_coding
  ENSMUST00000184162 Arhgef19-008 141246926-141247976 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000006618ENSMUST00000125392ENSMUST00000138096ENSMUST00000140536ENSMUST00000141834
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000006618 1.236±0.84 15.239±1.98 4.274±0.47 0.584±0.42 0.839±0.19 7.189±1.66 3.973±0.98 0.497±0.28 5.272±5.92 2.934±0.40 0.104±0.04 3.229±1.92 0.368±0.07 0.066±0.05
ENSMUST00000125392 N/A N/A N/A N/A 1.894±0.00 N/A N/A N/A N/A 2.793±0.00 0.103±0.00 N/A N/A N/A
ENSMUST00000138096 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.138±0.01 N/A N/A N/A
ENSMUST00000140536 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.055±0.00 N/A N/A N/A
ENSMUST00000141834 0.387±0.00 N/A N/A N/A 0.304±0.00 N/A 4.736±0.70 0.990±0.08 9.029±5.95 N/A 0.093±0.03 2.278±0.00 N/A 0.170±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QM CIL_0007QM_0002 VISTA 4:141236761-141837859

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0005096 IEA GTPase activator activity
GO:0032321 IGI positive regulation of Rho GTPase activity
GO:0032956 IEA regulation of actin cytoskeleton organization
GO:0042060 IMP wound healing

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078853 arhgef19 Rho guanine nucleotide exchange factor (GEF) 19 protein_coding Danio_rerio
ENSG00000142632 ARHGEF19 Rho guanine nucleotide exchange factor (GEF) 19 protein_coding Homo_sapiens

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