C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho guanine nucleotide exchange factor (GEF) 19
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000006618 Arhgef19-001 ENSMUSG00000028919 10090 + 4:141242869-141257564 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000006618
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000006618 1.236±0.84 15.239±1.98 4.274±0.47 0.584±0.42 0.839±0.19 7.189±1.66 3.973±0.98 0.497±0.28 5.272±5.92 2.934±0.40 0.104±0.04 3.229±1.92 0.368±0.07 0.066±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QM CIL_0007QM_0002 VISTA 4:141236761-141837859

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0005096 IEA GTPase activator activity
GO:0032321 IGI positive regulation of Rho GTPase activity
GO:0032956 IEA regulation of actin cytoskeleton organization
GO:0042060 IMP wound healing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000270747 ARHGEF19-001 protein_coding Homo_sapiens 0 2156
ENST00000441785 ARHGEF19-007 protein_coding Homo_sapiens 0 418
ENST00000449495 ARHGEF19-004 protein_coding Homo_sapiens 0 881
ENST00000471928 ARHGEF19-006 processed_transcript Homo_sapiens 0 473
ENST00000478117 ARHGEF19-005 processed_transcript Homo_sapiens 0 1037
ENST00000478210 ARHGEF19-003 processed_transcript Homo_sapiens 0 418

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