C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: peroxisomal biogenesis factor 10
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029047 Pex10 10090 + 4:155067016-155072433 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000103180 Pex10-001 155067016-155072433 protein_coding
  ENSMUST00000123395 Pex10-003 155067054-155068881 processed_transcript
  ENSMUST00000125432 Pex10-002 155067057-155072181 processed_transcript
  ENSMUST00000133116 Pex10-004 155067059-155068023 processed_transcript
  ENSMUST00000134341 Pex10-005 155067059-155069116 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000103180ENSMUST00000125432ENSMUST00000134341
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000103180 6.397±1.02 6.167±1.01 3.604±0.46 4.180±1.28 5.223±2.36 4.001±1.11 6.269±0.34 7.030±1.32 3.209±0.70 5.115±0.82 4.403±0.60 5.694±2.19 4.165±2.31 0.855±0.00
ENSMUST00000125432 1.152±0.13 1.638±0.00 0.968±0.00 1.527±0.86 1.521±0.68 0.894±0.00 1.322±0.51 1.306±0.47 1.005±0.49 1.306±0.16 0.441±0.11 2.744±1.59 1.412±0.24 0.676±0.41
ENSMUST00000134341 N/A 6.647±0.00 N/A N/A 3.519±0.00 3.259±0.00 N/A N/A N/A N/A N/A 5.844±1.12 2.333±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007XZ CIL_0007XZ_0002 VISTA 4:154471105-155072345
CIL_0007QV CIL_0007QV_0002 VISTA 4:154934679-155536167

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005622 IEA intracellular
GO:0005777 IEA peroxisome
GO:0005778 IEA peroxisomal membrane
GO:0005779 IEA integral component of peroxisomal membrane
GO:0007031 IEA peroxisome organization
GO:0008022 IEA protein C-terminus binding
GO:0008270 IEA zinc ion binding
GO:0016558 IEA protein import into peroxisome matrix

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041511 pex10 peroxisome biogenesis factor 10 protein_coding Danio_rerio
ENSG00000157911 PEX10 peroxisomal biogenesis factor 10 protein_coding Homo_sapiens

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