C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DnaJ (Hsp40) homolog, subfamily B, member 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029131 Dnajb6 10090 + 5:29735688-29786478 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000008733 Dnajb6-001 29735688-29786478 protein_coding
  ENSMUST00000012734 Dnajb6-003 29735995-29757969 protein_coding
  ENSMUST00000114839 Dnajb6-002 29735940-29767103 protein_coding
  ENSMUST00000127753 Dnajb6-004 29736024-29739089 processed_transcript
  ENSMUST00000139126 Dnajb6-008 29765190-29766687 retained_intron
  ENSMUST00000140376 Dnajb6-009 29764475-29781707 protein_coding
  ENSMUST00000149396 Dnajb6-007 29764181-29765627 retained_intron
  ENSMUST00000149553 Dnajb6-006 29754340-29757960 processed_transcript
  ENSMUST00000151976 Dnajb6-005 29750722-29752738 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000008733ENSMUST00000012734ENSMUST00000114839ENSMUST00000140376
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000008733 6.066±1.64 4.929±1.76 14.539±0.71 9.738±1.10 4.051±2.03 5.045±1.17 9.821±1.88 5.139±1.68 7.711±4.53 3.727±3.14 31.060±1.65 6.623±4.58 32.006±12.26 71.659±3.26
ENSMUST00000012734 N/A N/A N/A N/A N/A 5.244±0.57 N/A N/A N/A 7.197±1.04 N/A 10.189±6.05 N/A 114.002±43.30
ENSMUST00000114839 5.828±1.16 6.587±1.00 22.530±1.52 50.914±10.54 8.616±4.12 11.418±2.40 N/A 11.142±3.54 16.991±9.52 12.944±2.80 N/A 14.955±5.11 40.171±13.37 N/A
ENSMUST00000140376 N/A 5.179±0.90 N/A 78.701±0.00 3.499±0.00 N/A N/A N/A N/A N/A N/A 38.340±34.47 133.751±45.77 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0030036 IMP actin cytoskeleton organization
GO:0030198 IMP extracellular matrix organization
GO:0034504 IMP protein localization to nucleus
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0060710 IMP chorio-allantoic fusion
GO:0060715 IMP syncytiotrophoblast cell differentiation involved in labyrinthine layer development
GO:0060717 IMP chorion development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004680 dnajb6a DnaJ (Hsp40) homolog, subfamily B, member 6a protein_coding Danio_rerio
ENSDARG00000020953 dnajb6b DnaJ (Hsp40) homolog, subfamily B, member 6b protein_coding Danio_rerio

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