C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DnaJ (Hsp40) homolog, subfamily B, member 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000012734 Dnajb6-003 ENSMUSG00000029131 10090 + 5:29735995-29757969 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonLungOvaryTestisENSMUST00000012734
Transcript ID Colon Lung Ovary Testis
ENSMUST00000012734 5.244±0.57 7.197±1.04 10.189±6.05 114.002±43.30

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0030036 IMP actin cytoskeleton organization
GO:0030198 IMP extracellular matrix organization
GO:0034504 IMP protein localization to nucleus
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0060710 IMP chorio-allantoic fusion
GO:0060715 IMP syncytiotrophoblast cell differentiation involved in labyrinthine layer development
GO:0060717 IMP chorion development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262177 DNAJB6-001 protein_coding Homo_sapiens 0 518
ENST00000307221 DNAJB7-001 protein_coding Homo_sapiens 0 272
ENST00000405542 RP3-508D13.1-001 processed_pseudogene Homo_sapiens 2e-28 130
ENST00000412557 DNAJB6-011 protein_coding Homo_sapiens 0 497
ENST00000413707 RP11-100E13.3-001 processed_pseudogene Homo_sapiens 0 209
ENST00000413963 RP11-300I6.5-001 processed_pseudogene Homo_sapiens 0 361
ENST00000417758 DNAJB6-009 protein_coding Homo_sapiens 0 497
ENST00000429029 DNAJB6-002 protein_coding Homo_sapiens 0 518
ENST00000432257 RP4-763G1.1-001 processed_pseudogene Homo_sapiens 0 394
ENST00000441291 DNAJB6-015 nonsense_mediated_decay Homo_sapiens 0 507
ENST00000441561 DNAJB6-008 protein_coding Homo_sapiens 0 514
ENST00000443280 DNAJB6-007 protein_coding Homo_sapiens 0 518
ENST00000452903 AC009502.1-001 processed_pseudogene Homo_sapiens 2.00386e-43 180
ENST00000453383 DNAJB6-012 protein_coding Homo_sapiens 0 403
ENST00000459889 DNAJB6-004 retained_intron Homo_sapiens 0 514
ENST00000482652 XPNPEP3-002 processed_transcript Homo_sapiens 0 272
ENST00000485817 RP11-775J23.2-001 processed_pseudogene Homo_sapiens 0 324
ENST00000486083 DNAJB6-020 processed_transcript Homo_sapiens 0 625
ENST00000488001 DNAJB6-014 processed_transcript Homo_sapiens 0 514
ENST00000515686 RP11-14I17.1-001 processed_pseudogene Homo_sapiens 0 303
ENST00000526843 RP11-676M6.1-001 processed_pseudogene Homo_sapiens 0 473

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