C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: elastin microfibril interfacer 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029163 Emilin1 10090 + 5:30913402-30921278 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031055 Emilin1-001 30913402-30921278 protein_coding
  ENSMUST00000166839 Emilin1-002 30913739-30919703 retained_intron
  ENSMUST00000171922 Emilin1-003 30919605-30920865 retained_intron
  ENSMUST00000172453 Emilin1-004 30919921-30921049 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031055ENSMUST00000166839ENSMUST00000171922ENSMUST00000172453
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031055 24.638±18.67 13.790±2.42 22.600±4.04 2.586±1.72 7.490±3.96 25.558±2.89 6.466±0.52 12.077±0.77 7.844±2.53 25.966±2.53 1.377±0.25 37.322±10.26 39.792±16.76 0.679±0.33
ENSMUST00000166839 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.855±0.00 N/A 0.064±0.00
ENSMUST00000171922 N/A N/A N/A N/A 1.276±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172453 8.540±0.65 17.777±0.72 N/A 0.883±0.00 6.704±3.19 26.104±0.00 7.957±0.00 13.588±1.08 7.178±1.01 N/A 1.800±0.00 60.671±12.95 95.509±20.52 1.673±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WF CIL_0007WF_0002 VISTA 5:30314016-30916922
CIL_00004E CIL_00004E_0002 CGP 5:30905885-30921278
CIL_0000EL CIL_0000EL_0002 CGP 5:30913402-30931246

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005576 TAS extracellular region
GO:0005578 IDA proteinaceous extracellular matrix
GO:0005581 IEA collagen trimer
GO:0007155 IEA cell adhesion
GO:0010811 IDA positive regulation of cell-substrate adhesion
GO:0030023 IMP extracellular matrix constituent conferring elasticity
GO:0030198 IDA extracellular matrix organization
GO:0031012 IDA extracellular matrix
GO:0042802 IDA identical protein binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000024537 emilin1a elastin microfibril interfacer 1a protein_coding Danio_rerio
ENSDARG00000026166 emilin1b elastin microfibril interfacer 1b protein_coding Danio_rerio
ENSG00000138080 EMILIN1 elastin microfibril interfacer 1 protein_coding Homo_sapiens

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