C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: elastin microfibril interfacer 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031055 Emilin1-001 ENSMUSG00000029163 10090 + 5:30913402-30921278 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031055
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031055 24.638±18.67 13.790±2.42 22.600±4.04 2.586±1.72 7.490±3.96 25.558±2.89 6.466±0.52 12.077±0.77 7.844±2.53 25.966±2.53 1.377±0.25 37.322±10.26 39.792±16.76 0.679±0.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WF CIL_0007WF_0002 VISTA 5:30314016-30916922
CIL_00004E CIL_00004E_0002 CGP 5:30905885-30921278
CIL_0000EL CIL_0000EL_0002 CGP 5:30913402-30931246

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005576 TAS extracellular region
GO:0005578 IDA proteinaceous extracellular matrix
GO:0005581 IEA collagen trimer
GO:0007155 IEA cell adhesion
GO:0010811 IDA positive regulation of cell-substrate adhesion
GO:0030023 IMP extracellular matrix constituent conferring elasticity
GO:0030198 IDA extracellular matrix organization
GO:0031012 IDA extracellular matrix
GO:0042802 IDA identical protein binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000380320 EMILIN1-001 protein_coding Homo_sapiens 0 3149
ENST00000433140 EMILIN1-002 protein_coding Homo_sapiens 0 1070
ENST00000613734 EMILIN1-201 protein_coding Homo_sapiens 0 1072

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