C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 1700001C02 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029182 1700001C02Rik 10090 + 5:30466047-30484088 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031078 1700001C02Rik-001 30466059-30484088 protein_coding
  ENSMUST00000114743 1700001C02Rik-003 30466084-30484067 protein_coding
  ENSMUST00000127815 1700001C02Rik-002 30466047-30480906 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainColonHeartKidneyLungOvaryPlacentaTestisENSMUST00000031078ENSMUST00000114743ENSMUST00000127815
Transcript ID Adrenal Bladder Brain Colon Heart Kidney Lung Ovary Placenta Testis
ENSMUST00000031078 N/A 0.039±0.00 0.152±0.03 0.076±0.03 0.565±0.34 0.077±0.04 8.145±1.25 7.276±2.86 0.017±0.00 154.411±73.90
ENSMUST00000114743 0.058±0.00 N/A 0.099±0.03 N/A N/A N/A 1.548±0.34 1.690±0.95 N/A N/A
ENSMUST00000127815 0.108±0.04 N/A N/A N/A N/A 0.063±0.02 1.531±0.00 1.738±0.12 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WF CIL_0007WF_0002 VISTA 5:30314016-30916922
CIL_0007DN CIL_0007DN_0002 CGP 5:30367066-30484088
CIL_00004L CIL_00004L_0002 CGP 5:30466047-30545836

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089110 C20H2orf70 chromosome 2 open reading frame 70 protein_coding Danio_rerio
ENSG00000173557 C2orf70 chromosome 2 open reading frame 70 protein_coding Homo_sapiens

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