C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 1700001C02 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031078 1700001C02Rik-001 ENSMUSG00000029182 10090 + 5:30466059-30484088 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartKidneyLungOvaryPlacentaTestisENSMUST00000031078
Transcript ID Bladder Brain Colon Heart Kidney Lung Ovary Placenta Testis
ENSMUST00000031078 0.039±0.00 0.152±0.03 0.076±0.03 0.565±0.34 0.077±0.04 8.145±1.25 7.276±2.86 0.017±0.00 154.411±73.90

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WF CIL_0007WF_0002 VISTA 5:30314016-30916922
CIL_0007DN CIL_0007DN_0002 CGP 5:30367066-30484088
CIL_00004L CIL_00004L_0002 CGP 5:30466047-30545836

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000329615 C2orf70-004 protein_coding Homo_sapiens 0 374
ENST00000409392 C2orf70-001 protein_coding Homo_sapiens 0 270
ENST00000453368 C2orf70-003 protein_coding Homo_sapiens 0.0000000000001 81
ENST00000479453 C2orf70-002 retained_intron Homo_sapiens 0.0000000000007 81

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