C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: UDP-glucose dehydrogenase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029201 Ugdh 10090 - 5:65413202-65435946 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031103 Ugdh-001 65413221-65435946 protein_coding
  ENSMUST00000117542 Ugdh-002 65413202-65435731 protein_coding
  ENSMUST00000125375 Ugdh-004 65413224-65422660 retained_intron
  ENSMUST00000131263 Ugdh-005 65423354-65428374 protein_coding
  ENSMUST00000134123 Ugdh-003 65422510-65425474 retained_intron
  ENSMUST00000139402 Ugdh-006 65414005-65423219 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031103ENSMUST00000117542ENSMUST00000125375ENSMUST00000131263ENSMUST00000139402
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031103 12.946±1.35 6.584±1.36 100.710±19.65 12.611±8.71 7.941±1.11 24.110±2.41 2.857±0.50 13.895±1.15 11.771±4.47 7.337±0.64 1.329±0.39 6.054±1.93 15.826±13.35 0.576±0.24
ENSMUST00000117542 N/A N/A N/A 1.719±0.00 4.302±0.00 30.869±8.05 1.194±0.00 4.576±0.96 18.579±7.83 2.616±0.42 N/A 3.789±1.65 4.662±2.20 0.326±0.21
ENSMUST00000125375 1.645±0.09 1.293±0.24 9.192±1.32 2.525±1.23 2.061±0.36 5.265±0.00 0.396±0.01 N/A 0.852±0.27 0.913±0.00 0.196±0.05 1.583±0.41 0.740±0.26 0.137±0.07
ENSMUST00000131263 N/A N/A N/A 6.660±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 14.428±7.37 0.459±0.00
ENSMUST00000139402 17.522±2.36 6.860±1.13 N/A 3.487±0.00 12.233±4.61 47.317±8.29 2.800±0.82 19.274±2.35 26.865±3.91 4.466±0.52 N/A 11.679±2.41 6.950±0.00 0.314±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000278 CIL_000278_0003 CGP 5:65391497-65435946
CIL_0002TX CIL_0002TX_0003 CGP 5:65413202-65537184

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001702 IMP gastrulation with mouth forming second
GO:0003979 IEA UDP-glucose 6-dehydrogenase activity
GO:0005634 IEA nucleus
GO:0006065 IEA UDP-glucuronate biosynthetic process
GO:0051287 IEA NAD binding
GO:0055114 IEA oxidation-reduction process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019838 ugdh UDP-glucose dehydrogenase protein_coding Danio_rerio
ENSG00000109814 UGDH UDP-glucose 6-dehydrogenase protein_coding Homo_sapiens

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