C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000278_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000022845-ENSDARG00000019838 CGP 7955 1:22048804-22068847
GeneTranscriptPositionBiotype
ENSDARG00000019838 (ugdh)
UDP-glucose dehydrogenase 		ENSDART00000013263 (ugdh-001) 22057626-22068847 protein_coding
ENSDART00000122648 (ugdh-003) 22058232-22067355 protein_coding
ENSDARG00000022845 (lias)
lipoic acid synthetase 		ENSDART00000036448 (lias-001) 22048804-22057562 protein_coding
ENSDART00000144792 (lias-002) 22049016-22053796 processed_transcript
CIL_000278_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000121897-ENSG00000109814 CGP 9606 4:39459000-39528311
GeneTranscriptPositionBiotype
ENSG00000109814 (UGDH)
UDP-glucose 6-dehydrogenase 		ENST00000316423 (UGDH-001) 39498755-39527618 protein_coding
ENST00000501493 (UGDH-003) 39498763-39527437 protein_coding
ENST00000503779 (UGDH-012) 39510709-39527437 nonsense_mediated_decay
ENST00000505698 (UGDH-009) 39514093-39528311 protein_coding
ENST00000506179 (UGDH-005) 39498788-39526557 protein_coding
ENST00000507089 (UGDH-002) 39499911-39527439 protein_coding
ENST00000509391 (UGDH-007) 39510736-39527437 protein_coding
ENST00000510490 (UGDH-006) 39521352-39527598 protein_coding
ENST00000510881 (UGDH-011) 39510697-39527915 nonsense_mediated_decay
ENST00000514106 (UGDH-010) 39510667-39527900 protein_coding
ENST00000515021 (UGDH-004) 39510511-39527564 protein_coding
ENST00000515398 (UGDH-008) 39510815-39528233 processed_transcript
ENSG00000121897 (LIAS)
lipoic acid synthetase 		ENST00000261434 (LIAS-001) 39459000-39477653 protein_coding
ENST00000340169 (LIAS-008) 39459000-39477584 protein_coding
ENST00000381846 (LIAS-002) 39459072-39477621 protein_coding
ENST00000424936 (LIAS-004) 39459058-39464163 retained_intron
ENST00000509519 (LIAS-003) 39459045-39464238 retained_intron
ENST00000513731 (LIAS-006) 39459066-39477155 protein_coding
ENST00000515061 (LIAS-007) 39459120-39466072 processed_transcript
ENSG00000224097 (RP11-472B18.1)
 ENST00000507033 (RP11-472B18.1-001) 39480485-39481466 transcribed_processed_pseudogene
ENST00000513652 (RP11-472B18.1-003) 39480255-39481905 processed_transcript
ENST00000597991 (RP11-472B18.1-004) 39480357-39481765 processed_transcript
ENSG00000249348 (UGDH-AS1)
UGDH antisense RNA 1 		ENST00000504032 (UGDH-AS1-001) 39528019-39594707 antisense
CIL_000278_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029199-ENSMUSG00000029201 CGP 10090 5:65391497-65435946
GeneTranscriptPositionBiotype
ENSMUSG00000029199 (Lias)
lipoic acid synthetase 		ENSMUST00000031101 (Lias-001) 65391497-65410693 protein_coding
ENSMUST00000122026 (Lias-003) 65391541-65408950 protein_coding
ENSMUST00000126036 (Lias-004) 65391564-65395612 retained_intron
ENSMUST00000127519 (Lias-005) 65397542-65399918 retained_intron
ENSMUST00000139847 (Lias-002) 65391546-65396183 retained_intron
ENSMUSG00000029201 (Ugdh)
UDP-glucose dehydrogenase 		ENSMUST00000031103 (Ugdh-001) 65413221-65435946 protein_coding
ENSMUST00000117542 (Ugdh-002) 65413202-65435731 protein_coding
ENSMUST00000125375 (Ugdh-004) 65413224-65422660 retained_intron
ENSMUST00000131263 (Ugdh-005) 65423354-65428374 protein_coding
ENSMUST00000134123 (Ugdh-003) 65422510-65425474 retained_intron
ENSMUST00000139402 (Ugdh-006) 65414005-65423219 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000278_0001ENSDARG00000019838ENSDART00000013263ENSDART00000122648ENSDARG00000022845ENSDART00000036448ENSDART00000144792CIL_000278_0002ENSG00000109814ENST00000316423ENST00000501493ENST00000503779ENST00000505698ENST00000506179ENST00000507089ENST00000509391ENST00000510490ENST00000510881ENST00000514106ENST00000515021ENST00000515398ENSG00000121897ENST00000261434ENST00000340169ENST00000381846ENST00000424936ENST00000509519ENST00000513731ENST00000515061ENSG00000224097ENST00000507033ENST00000513652ENST00000597991ENSG00000249348ENST00000504032CIL_000278_0003ENSMUSG00000029199ENSMUST00000031101ENSMUST00000122026ENSMUST00000126036ENSMUST00000127519ENSMUST00000139847ENSMUSG00000029201ENSMUST00000031103ENSMUST00000117542ENSMUST00000125375ENSMUST00000131263ENSMUST00000134123ENSMUST00000139402
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000278_0001ENSDARG00000019838ENSDART00000013263ENSDART00000122648ENSDARG00000022845ENSDART00000036448CIL_000278_0002ENSG00000109814ENST00000316423ENST00000501493ENST00000507089ENSG00000121897ENST00000261434ENST00000340169ENST00000381846ENST00000424936ENST00000509519ENST00000513731ENST00000515061ENSG00000224097ENST00000507033ENST00000513652ENST00000597991ENSG00000249348ENST00000504032CIL_000278_0003ENSMUSG00000029199ENSMUST00000031101ENSMUST00000122026ENSMUST00000126036ENSMUSG00000029201ENSMUST00000031103ENSMUST00000117542ENSMUST00000125375ENSMUST00000131263ENSMUST00000139402
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000019838 ENSDART00000013263 N/A N/A N/A 1.281±0.20 N/A N/A 3.666±0.39 8.529±0.00 0.437±0.00 N/A 0.404±0.00 N/A N/A N/A
ENSDART00000122648 N/A N/A N/A N/A N/A N/A N/A 1.928±0.00 0.734±0.00 N/A 0.264±0.00 N/A N/A N/A
ENSDARG00000022845 ENSDART00000036448 N/A N/A N/A 7.965±4.72 N/A N/A 10.222±6.73 6.199±2.00 1.147±0.00 N/A 6.945±0.00 N/A N/A N/A
ENSDART00000144792 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000109814 ENST00000316423 8.321±0.00 3.428±0.00 1.642±0.00 0.966±0.00 8.568±1.41 19.284±10.65 0.975±0.07 15.870±2.70 15.297±6.38 5.251±2.42 1.115±0.00 9.321±0.33 4.871±2.81 6.310±0.00
ENST00000501493 N/A N/A N/A N/A N/A 3.029±0.00 N/A N/A 11.575±0.00 N/A N/A 10.980±0.00 6.377±0.00 N/A
ENST00000503779 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505698 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506179 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507089 14.386±0.00 2.632±0.00 3.869±0.00 2.182±0.00 8.723±0.00 12.497±3.60 1.875±0.00 9.989±2.79 20.564±0.00 8.312±4.10 1.731±0.00 17.840±3.57 8.700±6.46 4.609±0.00
ENST00000509391 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510490 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510881 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514106 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515021 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515398 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000121897 ENST00000261434 N/A 0.513±0.00 N/A 1.548±0.01 N/A 1.184±0.00 1.964±1.22 1.219±0.17 0.969±0.37 N/A 1.991±0.00 2.192±1.23 0.598±0.00 2.097±0.00
ENST00000340169 0.713±0.00 0.807±0.00 N/A 1.488±0.00 2.104±0.00 1.486±0.00 N/A 1.660±0.00 1.045±0.00 0.447±0.00 2.177±0.00 1.810±0.00 1.268±1.00 6.653±3.74
ENST00000381846 0.734±0.00 0.841±0.00 N/A 0.394±0.00 0.306±0.00 2.928±0.00 0.463±0.31 1.003±0.00 0.605±0.03 0.708±0.37 N/A 1.123±0.56 1.176±0.65 1.586±0.00
ENST00000424936 N/A N/A 1.937±0.00 N/A 1.364±0.00 0.469±0.00 N/A 1.129±0.00 N/A N/A N/A 0.794±0.00 N/A N/A
ENST00000509519 N/A N/A N/A N/A N/A N/A N/A N/A 0.697±0.00 0.670±0.00 N/A N/A N/A N/A
ENST00000513731 1.072±0.00 1.130±0.00 N/A 2.294±0.00 1.136±0.00 2.192±0.00 1.417±0.70 N/A 0.649±0.00 1.298±0.00 3.643±0.13 0.545±0.03 0.863±0.00 2.493±0.79
ENST00000515061 N/A N/A N/A N/A N/A N/A N/A 0.783±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000224097 ENST00000507033 0.158±0.00 0.179±0.00 N/A 0.076±0.00 0.123±0.00 0.096±0.00 0.162±0.00 0.634±0.00 N/A N/A 0.200±0.00 N/A 0.116±0.08 N/A
ENST00000513652 N/A 0.086±0.00 N/A 0.182±0.13 0.096±0.00 0.058±0.00 0.125±0.00 N/A 0.196±0.00 0.155±0.00 N/A 0.427±0.00 N/A 0.127±0.01
ENST00000597991 N/A N/A N/A 0.093±0.00 N/A 0.101±0.00 N/A 0.160±0.00 0.075±0.00 N/A N/A 0.307±0.00 N/A 0.065±0.00
ENSG00000249348 ENST00000504032 N/A 3.023±0.00 5.313±0.00 4.452±0.95 9.979±0.00 5.666±0.00 3.089±1.37 5.452±0.00 8.713±0.00 7.927±0.00 0.683±0.16 3.948±1.63 1.462±0.55 4.598±2.53
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029199 ENSMUST00000031101 2.638±0.18 1.578±0.74 3.679±0.22 3.752±0.59 1.760±0.64 2.018±0.31 2.538±0.20 3.122±0.39 2.875±1.14 1.917±0.42 3.164±0.77 2.761±0.90 2.375±0.99 1.973±0.43
ENSMUST00000122026 11.696±3.80 6.018±2.02 9.509±3.47 9.616±4.05 7.577±1.01 7.316±1.58 7.822±3.09 10.564±3.20 11.093±3.08 5.991±0.97 11.991±2.53 8.934±2.72 14.466±2.31 17.339±2.97
ENSMUST00000126036 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.644±0.08 8.905±0.31
ENSMUST00000127519 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139847 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000029201 ENSMUST00000031103 12.946±1.35 6.584±1.36 100.710±19.65 12.611±8.71 7.941±1.11 24.110±2.41 2.857±0.50 13.895±1.15 11.771±4.47 7.337±0.64 1.329±0.39 6.054±1.93 15.826±13.35 0.576±0.24
ENSMUST00000117542 N/A N/A N/A 1.719±0.00 4.302±0.00 30.869±8.05 1.194±0.00 4.576±0.96 18.579±7.83 2.616±0.42 N/A 3.789±1.65 4.662±2.20 0.326±0.21
ENSMUST00000125375 1.645±0.09 1.293±0.24 9.192±1.32 2.525±1.23 2.061±0.36 5.265±0.00 0.396±0.01 N/A 0.852±0.27 0.913±0.00 0.196±0.05 1.583±0.41 0.740±0.26 0.137±0.07
ENSMUST00000131263 N/A N/A N/A 6.660±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 14.428±7.37 0.459±0.00
ENSMUST00000134123 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139402 17.522±2.36 6.860±1.13 N/A 3.487±0.00 12.233±4.61 47.317±8.29 2.800±0.82 19.274±2.35 26.865±3.91 4.466±0.52 N/A 11.679±2.41 6.950±0.00 0.314±0.00

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