C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 1700023E05 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029248 1700023E05Rik 10090 + 5:77016023-77061529 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031161 1700023E05Rik-001 77016023-77061522 protein_coding
  ENSMUST00000117880 1700023E05Rik-004 77016023-77061529 protein_coding
  ENSMUST00000118941 1700023E05Rik-002 77037054-77047495 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000031161ENSMUST00000117880ENSMUST00000118941
Transcript ID Bladder Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000031161 N/A 0.059±0.02 N/A 0.113±0.00 N/A N/A 0.260±0.06 0.524±0.00 0.161±0.12 55.731±15.25
ENSMUST00000117880 0.010±0.00 N/A 0.033±0.01 0.018±0.00 0.019±0.00 0.025±0.00 0.049±0.00 0.098±0.05 0.173±0.07 N/A
ENSMUST00000118941 N/A N/A N/A N/A N/A N/A N/A 0.137±0.03 N/A 21.950±0.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008G9 CIL_0008G9_0002 VISTA 5:76829880-77430993
CIL_0001WM CIL_0001WM_0002 CGP 5:77004055-77061529
CIL_0001WR CIL_0001WR_0002 CGP 5:77016023-77115121

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000249693 THEGL theg spermatid protein-like protein_coding Homo_sapiens

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