C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001WR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000249693-ENSG00000171476 CGP 9606 4:56530609-56681899
GeneTranscriptPositionBiotype
ENSG00000171476 (HOPX)
HOP homeobox 		ENST00000317745 (HOPX-006) 56647998-56656516 protein_coding
ENST00000337881 (HOPX-003) 56647988-56681899 protein_coding
ENST00000381255 (HOPX-017) 56647998-56656507 protein_coding
ENST00000381260 (HOPX-008) 56647998-56681707 protein_coding
ENST00000420433 (HOPX-014) 56647988-56681706 protein_coding
ENST00000503639 (HOPX-001) 56647998-56656304 protein_coding
ENST00000503864 (HOPX-004) 56648000-56651202 retained_intron
ENST00000506661 (HOPX-018) 56678758-56681297 retained_intron
ENST00000508121 (HOPX-007) 56648275-56681877 protein_coding
ENST00000553379 (HOPX-010) 56647998-56656487 protein_coding
ENST00000554144 (HOPX-201) 56647989-56681706 protein_coding
ENST00000555760 (HOPX-016) 56647998-56656522 protein_coding
ENST00000556376 (HOPX-009) 56647998-56681294 protein_coding
ENST00000556614 (HOPX-015) 56647998-56656525 protein_coding
ENST00000605395 (HOPX-011) 56659152-56681297 processed_transcript
ENSG00000248590 (GLDCP1)
glycine dehydrogenase (decarboxylase) pseudogene 1 		ENST00000510885 (GLDCP1-001) 56593004-56595681 transcribed_processed_pseudogene
ENSG00000280285 (RP11-630A13.4)
 ENST00000624463 (RP11-630A13.4-001) 56662469-56665694 TEC
CIL_0001WR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029248-ENSMUSG00000059325 CGP 10090 5:77016023-77115121
GeneTranscriptPositionBiotype
ENSMUSG00000029248 (1700023E05Rik)
RIKEN cDNA 1700023E05 gene 		ENSMUST00000031161 (1700023E05Rik-001) 77016023-77061522 protein_coding
ENSMUST00000117880 (1700023E05Rik-004) 77016023-77061529 protein_coding
ENSMUST00000118941 (1700023E05Rik-002) 77037054-77047495 protein_coding
ENSMUSG00000059325 (Hopx)
HOP homeobox 		ENSMUST00000081964 (Hopx-001) 77086988-77115121 protein_coding
ENSMUST00000113453 (Hopx-002) 77086988-77095277 protein_coding
ENSMUST00000120827 (Hopx-003) 77086988-77095253 protein_coding
ENSMUSG00000086632 (1700112J05Rik)
RIKEN cDNA 1700112J05 gene 		ENSMUST00000129353 (1700112J05Rik-001) 77006449-77018863 lincRNA
ENSMUSG00000087541 (Hopxos)
HOP homeobox, opposite strand 		ENSMUST00000148568 (Hopxos-001) 77094532-77102303 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001WR_0001ENSG00000171476ENST00000317745ENST00000337881ENST00000381255ENST00000381260ENST00000420433ENST00000503639ENST00000503864ENST00000506661ENST00000508121ENST00000553379ENST00000554144ENST00000555760ENST00000556376ENST00000556614ENST00000605395ENSG00000248590ENST00000510885ENSG00000280285ENST00000624463CIL_0001WR_0002ENSMUSG00000029248ENSMUST00000031161ENSMUST00000117880ENSMUST00000118941ENSMUSG00000059325ENSMUST00000081964ENSMUST00000113453ENSMUST00000120827ENSMUSG00000086632ENSMUST00000129353ENSMUSG00000087541ENSMUST00000148568
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001WR_0001ENSG00000171476ENST00000317745ENST00000337881ENST00000381255ENST00000420433ENST00000503639ENST00000503864ENST00000506661ENST00000553379ENST00000555760ENST00000605395ENSG00000248590ENST00000510885ENSG00000280285ENST00000624463CIL_0001WR_0002ENSMUSG00000029248ENSMUST00000031161ENSMUST00000117880ENSMUST00000118941ENSMUSG00000059325ENSMUST00000081964ENSMUST00000113453ENSMUSG00000086632ENSMUST00000129353ENSMUSG00000087541ENSMUST00000148568
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000171476 ENST00000317745 N/A 3.055±0.00 N/A 8.328±0.00 2.241±0.00 2.623±1.33 N/A 3.083±0.00 N/A N/A N/A 4.401±1.65 N/A 6.949±0.60
ENST00000337881 N/A N/A 0.195±0.00 14.772±0.00 N/A N/A 0.146±0.00 0.093±0.00 N/A 16.775±0.00 N/A 0.448±0.00 N/A N/A
ENST00000381255 1.145±0.00 2.878±0.00 N/A N/A 0.412±0.00 N/A N/A N/A 1.311±0.00 N/A N/A 3.737±0.00 8.487±0.00 N/A
ENST00000381260 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000420433 N/A N/A N/A 8.970±0.00 N/A N/A 0.102±0.00 N/A N/A N/A N/A 1.468±0.00 N/A N/A
ENST00000503639 0.269±0.00 3.405±0.00 N/A 6.889±0.00 0.450±0.00 0.381±0.00 N/A 0.729±0.00 N/A N/A N/A N/A N/A N/A
ENST00000503864 N/A N/A 0.168±0.00 N/A N/A N/A N/A 0.127±0.00 N/A N/A N/A N/A N/A N/A
ENST00000506661 0.135±0.00 N/A N/A N/A 0.126±0.00 N/A 0.152±0.00 N/A 0.095±0.00 5.817±0.00 0.075±0.00 0.272±0.00 1.699±0.00 N/A
ENST00000508121 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553379 N/A N/A N/A 39.105±0.00 0.295±0.00 4.800±0.00 3.301±3.08 0.982±0.40 0.285±0.00 162.450±0.00 0.466±0.02 6.192±3.17 48.636±39.36 16.015±4.37
ENST00000554144 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555760 N/A 1.955±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.798±0.00 N/A N/A
ENST00000556376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556614 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000605395 N/A N/A 0.254±0.00 N/A N/A N/A N/A N/A N/A N/A 0.406±0.14 N/A N/A N/A
ENSG00000248590 ENST00000510885 N/A N/A N/A N/A N/A N/A N/A 0.006±0.00 0.011±0.00 N/A N/A N/A 0.035±0.00 0.012±0.00
ENSG00000280285 ENST00000624463 0.043±0.00 0.336±0.00 0.153±0.00 0.137±0.05 0.158±0.05 0.060±0.03 0.123±0.02 0.071±0.00 0.183±0.17 0.999±0.89 0.025±0.00 0.049±0.02 0.109±0.07 0.257±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029248 ENSMUST00000031161 N/A N/A N/A 0.059±0.02 N/A N/A 0.113±0.00 N/A N/A 0.260±0.06 N/A 0.524±0.00 0.161±0.12 55.731±15.25
ENSMUST00000117880 N/A N/A 0.010±0.00 N/A 0.033±0.01 N/A 0.018±0.00 0.019±0.00 0.025±0.00 0.049±0.00 N/A 0.098±0.05 0.173±0.07 N/A
ENSMUST00000118941 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.137±0.03 N/A 21.950±0.38
ENSMUSG00000059325 ENSMUST00000081964 2.311±0.18 N/A 30.382±11.29 1.629±0.37 0.768±0.00 9.727±2.25 81.998±13.77 N/A 0.103±0.01 244.666±73.73 N/A 2.620±0.87 1.252±0.18 N/A
ENSMUST00000113453 2.195±1.16 0.687±0.22 5.357±0.00 4.205±1.31 4.357±1.36 N/A 15.257±2.98 3.300±0.49 8.046±5.61 N/A 1.456±0.42 2.514±1.43 7.540±5.12 3.013±1.38
ENSMUST00000120827 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000086632 ENSMUST00000129353 0.069±0.02 N/A 0.020±0.00 0.039±0.00 0.259±0.00 N/A N/A 0.061±0.03 0.026±0.00 0.069±0.00 N/A 0.126±0.08 0.091±0.06 11.136±1.10
ENSMUSG00000087541 ENSMUST00000148568 1.931±0.10 1.944±0.83 N/A 1.056±0.24 5.680±1.29 13.519±2.37 17.583±5.36 2.891±0.64 10.046±7.81 39.852±7.63 0.168±0.03 4.410±1.63 1.496±0.84 2.266±1.14

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