C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein L6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029614 Rpl6 10090 + 5:121204481-121209241 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031617 Rpl6-001 121204481-121209241 protein_coding
  ENSMUST00000124330 Rpl6-003 121205409-121206445 retained_intron
  ENSMUST00000138621 Rpl6-006 121208196-121208966 retained_intron
  ENSMUST00000139177 Rpl6-005 121207077-121208555 retained_intron
  ENSMUST00000140515 Rpl6-004 121206638-121207384 retained_intron
  ENSMUST00000146579 Rpl6-002 121204521-121206202 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031617ENSMUST00000138621
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031617 98.912±66.92 133.982±9.79 202.737±120.73 97.125±69.17 105.230±63.59 129.609±72.57 51.082±19.46 100.804±41.31 147.676±85.58 37.280±8.66 71.216±33.29 153.579±121.18 182.920±118.55 36.166±15.83
ENSMUST00000138621 N/A N/A N/A 25.793±0.00 N/A N/A N/A N/A N/A N/A N/A 233.246±0.00 168.022±3.01 13.537±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005634 ISA nucleus
GO:0005730 ISA nucleolus
GO:0005737 ISA cytoplasm
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058451 rpl6 ribosomal protein L6 protein_coding Danio_rerio
ENSG00000089009 RPL6 ribosomal protein L6 protein_coding Homo_sapiens

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