C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NEDD4 binding protein 2-like 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029655 N4bp2l2 10090 - 5:150608007-150665612 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000118316 N4bp2l2-001 150635972-150665612 protein_coding
  ENSMUST00000141857 N4bp2l2-003 150662417-150665346 protein_coding
  ENSMUST00000144378 N4bp2l2-002 150648210-150665577 retained_intron
  ENSMUST00000145822 N4bp2l2-005 150643013-150647793 retained_intron
  ENSMUST00000156180 N4bp2l2-004 150643000-150661487 protein_coding
  ENSMUST00000164332 N4bp2l2-006 150608007-150647519 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000118316ENSMUST00000141857ENSMUST00000144378ENSMUST00000145822ENSMUST00000164332
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000118316 2.087±0.53 1.680±0.35 4.040±0.40 3.798±2.27 1.754±0.37 1.184±0.25 1.161±0.08 1.696±0.21 2.737±0.87 3.135±0.31 0.512±0.07 2.537±0.92 2.009±1.30 1.608±0.58
ENSMUST00000141857 N/A 6.909±1.78 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144378 0.811±0.00 0.852±0.22 2.088±0.21 N/A 0.930±0.16 0.893±0.30 0.547±0.00 0.580±0.00 2.848±1.13 1.381±0.18 N/A 1.651±0.97 3.651±1.42 2.828±0.00
ENSMUST00000145822 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 27.465±0.00 30.037±7.28 28.062±0.00
ENSMUST00000164332 N/A N/A N/A 18.945±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006FL CIL_0006FL_0002 CGP 5:150608007-150810690

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IMP negative regulation of transcription from RNA polymerase II promoter
GO:0001106 IMP RNA polymerase II transcription corepressor activity
GO:0001701 IMP in utero embryonic development
GO:0001824 IMP blastocyst development
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089105 protein_coding Danio_rerio

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