C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NEDD4 binding protein 2-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118316 N4bp2l2-001 ENSMUSG00000029655 10090 - 5:150635972-150665612 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000118316
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000118316 2.087±0.53 1.680±0.35 4.040±0.40 3.798±2.27 1.754±0.37 1.184±0.25 1.161±0.08 1.696±0.21 2.737±0.87 3.135±0.31 0.512±0.07 2.537±0.92 2.009±1.30 1.608±0.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006FL CIL_0006FL_0002 CGP 5:150608007-150810690

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IMP negative regulation of transcription from RNA polymerase II promoter
GO:0001106 IMP RNA polymerase II transcription corepressor activity
GO:0001701 IMP in utero embryonic development
GO:0001824 IMP blastocyst development
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000187762 TMEM38A-001 protein_coding Homo_sapiens 0.000000002 69
ENST00000267068 N4BP2L2-001 protein_coding Homo_sapiens 0 1354
ENST00000357505 N4BP2L2-201 protein_coding Homo_sapiens 0 394
ENST00000399396 N4BP2L2-202 protein_coding Homo_sapiens 0 394
ENST00000446957 N4BP2L2-011 protein_coding Homo_sapiens 0 1210
ENST00000475731 N4BP2L2-002 processed_transcript Homo_sapiens 0 435
ENST00000483088 N4BP2L2-003 processed_transcript Homo_sapiens 0 243
ENST00000503814 N4BP2L2-007 retained_intron Homo_sapiens 0 433
ENST00000504114 N4BP2L2-004 protein_coding Homo_sapiens 0 394
ENST00000505213 N4BP2L2-005 protein_coding Homo_sapiens 0 1210
ENST00000509076 N4BP2L2-006 retained_intron Homo_sapiens 0 289
ENST00000511143 N4BP2L2-010 processed_transcript Homo_sapiens 0 211
ENST00000512755 N4BP2L2-008 processed_transcript Homo_sapiens 0 606

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