C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: inhibitor of growth family, member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029670 Ing3 10090 + 6:21949571-21976038 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031680 Ing3-001 21949571-21976038 protein_coding
  ENSMUST00000115389 Ing3-005 21949657-21974903 protein_coding
  ENSMUST00000136161 Ing3-009 21950045-21971228 processed_transcript
  ENSMUST00000136200 Ing3-003 21949654-21974131 nonsense_mediated_decay
  ENSMUST00000141689 Ing3-010 21952057-21954256 retained_intron
  ENSMUST00000144534 Ing3-002 21949649-21974530 retained_intron
  ENSMUST00000146684 Ing3-007 21950010-21973969 processed_transcript
  ENSMUST00000149728 Ing3-008 21950017-21967671 processed_transcript
  ENSMUST00000151473 Ing3-006 21949670-21970064 protein_coding
  ENSMUST00000152877 Ing3-004 21949685-21974143 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031680ENSMUST00000115389ENSMUST00000136161ENSMUST00000136200ENSMUST00000144534ENSMUST00000146684ENSMUST00000149728ENSMUST00000151473ENSMUST00000152877
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031680 0.874±0.01 0.435±0.13 0.701±0.01 0.960±0.31 0.487±0.08 0.343±0.09 0.413±0.16 0.728±0.05 0.369±0.13 0.638±0.30 0.314±0.10 0.631±0.19 1.399±0.65 N/A
ENSMUST00000115389 1.475±0.00 0.858±0.00 1.249±0.24 1.407±0.55 1.063±0.51 1.067±0.25 0.434±0.00 0.974±0.08 1.216±0.54 1.121±0.00 0.585±0.25 2.512±0.70 2.734±1.67 N/A
ENSMUST00000136161 N/A 1.785±0.52 N/A N/A N/A 1.004±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136200 2.063±0.39 1.064±0.16 2.745±0.04 2.578±0.90 1.398±0.44 2.023±0.11 1.066±0.33 2.410±0.86 1.763±0.73 2.312±1.13 0.931±0.36 2.766±1.44 4.764±1.60 4.387±0.56
ENSMUST00000144534 0.608±0.13 0.921±0.00 0.690±0.04 0.765±0.00 N/A 0.904±0.17 N/A 0.891±0.18 0.457±0.09 0.842±0.15 0.254±0.00 1.406±0.36 N/A N/A
ENSMUST00000146684 N/A 1.225±0.12 N/A 6.520±0.00 3.437±1.37 N/A 0.955±0.00 N/A N/A N/A N/A 10.883±0.00 8.309±2.34 8.184±0.00
ENSMUST00000149728 N/A N/A N/A 12.119±0.00 N/A N/A N/A N/A N/A N/A N/A 19.510±0.00 18.716±6.33 22.914±0.00
ENSMUST00000151473 N/A 2.433±0.57 N/A N/A 2.233±0.00 N/A N/A N/A N/A N/A N/A 1.725±0.20 N/A N/A
ENSMUST00000152877 1.640±0.24 1.718±0.61 1.472±0.00 1.836±0.19 1.614±0.44 1.404±0.31 1.348±0.17 3.074±1.09 1.160±0.53 1.721±0.18 0.961±0.37 3.352±1.65 3.899±1.57 3.103±0.53

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SO CIL_0007SO_0002 VISTA 6:21578055-22180750
CIL_0004XL CIL_0004XL_0003 CGP 6:21771395-21976038
CIL_0005U9 CIL_0005U9_0003 CGP 6:21949571-22256404

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000812 ISS Swr1 complex
GO:0004402 ISS histone acetyltransferase activity
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0016568 IEA chromatin modification
GO:0032777 ISS Piccolo NuA4 histone acetyltransferase complex
GO:0035064 IEA methylated histone binding
GO:0035267 ISS NuA4 histone acetyltransferase complex
GO:0040008 IEA regulation of growth
GO:0043065 ISS positive regulation of apoptotic process
GO:0043967 ISS histone H4 acetylation
GO:0043968 ISS histone H2A acetylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034326 ing3 inhibitor of growth family, member 3 protein_coding Danio_rerio
ENSG00000071243 ING3 inhibitor of growth family, member 3 protein_coding Homo_sapiens

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