C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: inhibitor of growth family, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031680 Ing3-001 ENSMUSG00000029670 10090 + 6:21949571-21976038 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000031680
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000031680 0.874±0.01 0.435±0.13 0.701±0.01 0.960±0.31 0.487±0.08 0.343±0.09 0.413±0.16 0.728±0.05 0.369±0.13 0.638±0.30 0.314±0.10 0.631±0.19 1.399±0.65

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SO CIL_0007SO_0002 VISTA 6:21578055-22180750
CIL_0004XL CIL_0004XL_0003 CGP 6:21771395-21976038
CIL_0005U9 CIL_0005U9_0003 CGP 6:21949571-22256404

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000812 ISS Swr1 complex
GO:0004402 ISS histone acetyltransferase activity
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0032777 ISS Piccolo NuA4 histone acetyltransferase complex
GO:0035064 IEA methylated histone binding
GO:0035267 ISS NuA4 histone acetyltransferase complex
GO:0040008 IEA regulation of growth
GO:0043065 ISS positive regulation of apoptotic process
GO:0043967 ISS histone H4 acetylation
GO:0043968 ISS histone H2A acetylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000315870 ING3-001 protein_coding Homo_sapiens 0 2761
ENST00000339121 ING3-002 protein_coding Homo_sapiens 0 577
ENST00000427726 ING3-005 nonsense_mediated_decay Homo_sapiens 0 1419
ENST00000431467 ING3-006 protein_coding Homo_sapiens 0 1487
ENST00000445699 ING3-003 protein_coding Homo_sapiens 0 532
ENST00000497502 ING3-004 retained_intron Homo_sapiens 0 621

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