C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: serine-rich single-pass membrane protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029784 Ssmem1 10090 + 6:30509849-30520254 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031797 Ssmem1-002 30509849-30520253 protein_coding
  ENSMUST00000031798 Ssmem1-001 30512286-30520254 protein_coding
  ENSMUST00000131485 Ssmem1-003 30513698-30519544 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000031797ENSMUST00000031798ENSMUST00000131485
Transcript ID Adipose Bladder Brain Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000031797 N/A 0.033±0.00 0.030±0.01 N/A 0.066±0.00 0.062±0.02 0.014±0.00 0.061±0.06 0.063±0.01 22.622±6.47
ENSMUST00000031798 0.032±0.00 N/A 0.036±0.00 0.082±0.02 0.044±0.01 0.052±0.05 0.065±0.00 N/A 0.088±0.00 42.476±17.48
ENSMUST00000131485 N/A N/A 0.113±0.00 N/A N/A N/A N/A N/A 0.303±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PP CIL_0008PP_0002 VISTA 6:30335908-30937352
CIL_000273 CIL_000273_0002 CGP 6:30479053-30520254
CIL_000276 CIL_000276_0002 CGP 6:30509849-30564476

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000165120 SSMEM1 serine-rich single-pass membrane protein 1 protein_coding Homo_sapiens

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