C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000276_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000165120-ENSG00000158516 CGP 9606 7:130207860-130289798
GeneTranscriptPositionBiotype
ENSG00000158516 (CPA2)
carboxypeptidase A2 (pancreatic) 		ENST00000222481 (CPA2-001) 130266827-130289798 protein_coding
ENST00000416698 (CPA2-004) 130266881-130276738 nonsense_mediated_decay
ENST00000480781 (CPA2-003) 130266865-130273240 retained_intron
ENST00000487259 (CPA2-002) 130266867-130277032 retained_intron
ENSG00000165120 (SSMEM1)
serine-rich single-pass membrane protein 1 		ENST00000297819 (SSMEM1-001) 130207860-130216843 protein_coding
ENSG00000270992 (RP11-190G13.4)
 ENST00000604299 (RP11-190G13.4-001) 130255902-130262770 processed_pseudogene
CIL_000276_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029784-ENSMUSG00000071553 CGP 10090 6:30509849-30564476
GeneTranscriptPositionBiotype
ENSMUSG00000029784 (Ssmem1)
serine-rich single-pass membrane protein 1 		ENSMUST00000031797 (Ssmem1-002) 30509849-30520253 protein_coding
ENSMUST00000031798 (Ssmem1-001) 30512286-30520254 protein_coding
ENSMUST00000131485 (Ssmem1-003) 30513698-30519544 protein_coding
ENSMUSG00000071553 (Cpa2)
carboxypeptidase A2, pancreatic 		ENSMUST00000096066 (Cpa2-001) 30541582-30564476 protein_coding
ENSMUST00000123588 (Cpa2-008) 30546642-30547155 processed_transcript
ENSMUST00000126426 (Cpa2-006) 30543916-30552056 retained_intron
ENSMUST00000131137 (Cpa2-003) 30541670-30547110 processed_transcript
ENSMUST00000133009 (Cpa2-002) 30541642-30544472 retained_intron
ENSMUST00000142653 (Cpa2-004) 30543208-30544992 retained_intron
ENSMUST00000144282 (Cpa2-007) 30551903-30564248 processed_transcript
ENSMUST00000146936 (Cpa2-009) 30544485-30549285 retained_intron
ENSMUST00000151684 (Cpa2-005) 30543277-30547206 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000276_0001ENSG00000158516ENST00000222481ENST00000416698ENST00000480781ENST00000487259ENSG00000165120ENST00000297819ENSG00000270992ENST00000604299CIL_000276_0002ENSMUSG00000029784ENSMUST00000031797ENSMUST00000031798ENSMUST00000131485ENSMUSG00000071553ENSMUST00000096066ENSMUST00000123588ENSMUST00000126426ENSMUST00000131137ENSMUST00000133009ENSMUST00000142653ENSMUST00000144282ENSMUST00000146936ENSMUST00000151684
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000276_0001ENSG00000158516ENST00000222481ENST00000416698ENST00000487259ENSG00000165120ENST00000297819ENSG00000270992ENST00000604299CIL_000276_0002ENSMUSG00000029784ENSMUST00000031797ENSMUST00000031798ENSMUST00000131485ENSMUSG00000071553ENSMUST00000096066ENSMUST00000126426ENSMUST00000144282ENSMUST00000146936
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000158516 ENST00000222481 0.021±0.00 0.045±0.00 N/A 0.169±0.00 0.250±0.12 0.042±0.00 0.035±0.03 N/A N/A N/A N/A 0.057±0.05 0.150±0.06 0.293±0.00
ENST00000416698 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.064±0.00 N/A N/A 0.065±0.00 0.382±0.00
ENST00000480781 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487259 N/A N/A N/A 0.092±0.00 0.081±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000165120 ENST00000297819 0.040±0.00 0.070±0.00 N/A N/A 0.010±0.00 0.023±0.00 N/A N/A N/A N/A N/A N/A 0.052±0.02 12.295±1.76
ENSG00000270992 ENST00000604299 N/A N/A N/A N/A N/A 0.038±0.00 N/A N/A N/A N/A 0.034±0.00 N/A N/A 0.035±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029784 ENSMUST00000031797 N/A N/A 0.033±0.00 0.030±0.01 N/A N/A N/A 0.066±0.00 0.062±0.02 N/A 0.014±0.00 0.061±0.06 0.063±0.01 22.622±6.47
ENSMUST00000031798 0.032±0.00 N/A N/A 0.036±0.00 N/A N/A 0.082±0.02 0.044±0.01 0.052±0.05 N/A 0.065±0.00 N/A 0.088±0.00 42.476±17.48
ENSMUST00000131485 N/A N/A N/A 0.113±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.303±0.00 N/A
ENSMUSG00000071553 ENSMUST00000096066 0.297±0.17 0.082±0.01 0.051±0.00 0.267±0.08 0.205±0.07 40.830±32.92 0.058±0.01 0.066±0.03 0.307±0.25 0.161±0.10 0.031±0.00 0.577±0.34 0.443±0.23 0.298±0.15
ENSMUST00000123588 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126426 N/A 0.347±0.00 N/A N/A N/A 0.562±0.22 N/A N/A 0.059±0.02 0.089±0.00 0.051±0.00 0.469±0.31 0.059±0.00 N/A
ENSMUST00000131137 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133009 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142653 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144282 N/A N/A 0.032±0.00 0.777±0.22 0.471±0.00 0.353±0.00 N/A N/A 0.060±0.00 N/A N/A N/A 0.345±0.00 0.524±0.00
ENSMUST00000146936 N/A N/A N/A N/A N/A N/A N/A N/A 0.050±0.00 N/A N/A N/A N/A N/A
ENSMUST00000151684 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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