C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATP-binding cassette, sub-family G (WHITE), member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029802 Abcg2 10090 + 6:58584523-58692869 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031822 Abcg2-001 58596671-58692451 protein_coding
  ENSMUST00000114294 Abcg2-007 58640564-58692511 protein_coding
  ENSMUST00000124542 Abcg2-002 58640546-58664783 retained_intron
  ENSMUST00000134426 Abcg2-003 58677621-58684637 retained_intron
  ENSMUST00000143447 Abcg2-006 58662836-58664746 processed_transcript
  ENSMUST00000143752 Abcg2-004 58640560-58692869 nonsense_mediated_decay
  ENSMUST00000145161 Abcg2-008 58640560-58665244 protein_coding
  ENSMUST00000145685 Abcg2-010 58674568-58692375 nonsense_mediated_decay
  ENSMUST00000147213 Abcg2-009 58584523-58664530 protein_coding
  ENSMUST00000148008 Abcg2-005 58595975-58655808 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031822ENSMUST00000114294ENSMUST00000143752
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031822 2.830±0.69 2.579±1.07 2.484±0.89 3.020±0.00 3.207±1.42 1.402±0.00 2.103±0.78 N/A N/A 6.105±1.43 1.113±0.36 4.023±1.90 2.812±0.44 N/A
ENSMUST00000114294 6.442±0.84 N/A 7.905±0.96 3.457±0.99 4.965±2.50 17.197±3.70 3.493±0.19 93.935±17.12 32.315±21.89 2.216±0.57 7.027±1.06 3.583±1.93 35.063±30.67 6.145±1.82
ENSMUST00000143752 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.889±0.13 0.642±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005739 IEA mitochondrion
GO:0005886 TAS plasma membrane
GO:0006200 IEA ATP catabolic process
GO:0006855 IEA drug transmembrane transport
GO:0008559 EXP xenobiotic-transporting ATPase activity
GO:0010039 IEA response to iron ion
GO:0015238 IEA drug transmembrane transporter activity
GO:0015893 IEA drug transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016324 IEA apical plasma membrane
GO:0016887 IEA ATPase activity
GO:0042908 EXP xenobiotic transport
GO:0046618 IEA drug export
GO:0046983 IEA protein dimerization activity
GO:0051593 IEA response to folic acid
GO:0060136 IEA embryonic process involved in female pregnancy
GO:0071549 IEA cellular response to dexamethasone stimulus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016818 abcg2d ATP-binding cassette, sub-family G (WHITE), member 2d protein_coding Danio_rerio
ENSDARG00000043037 abcg2a ATP-binding cassette, sub-family G (WHITE), member 2a protein_coding Danio_rerio
ENSG00000118777 ABCG2 ATP-binding cassette, sub-family G (WHITE), member 2 (Junior blood group) protein_coding Homo_sapiens

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