C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: hematopoietic prostaglandin D synthase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029919 Hpgds 10090 - 6:65117293-65144908 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031982 Hpgds-001 65117293-65144908 protein_coding
  ENSMUST00000170252 Hpgds-002 65131980-65138271 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031982ENSMUST00000170252
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031982 1.446±0.38 0.281±0.13 1.198±0.13 1.144±0.16 0.761±0.24 0.753±0.18 0.138±0.07 0.380±0.05 0.507±0.40 0.339±0.13 0.080±0.02 2.873±1.36 2.692±1.57 0.249±0.13
ENSMUST00000170252 N/A 0.645±0.00 N/A N/A 1.701±0.00 1.127±0.37 0.403±0.00 N/A N/A 0.513±0.00 0.118±0.00 4.023±0.64 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000KQ CIL_0000KQ_0002 CGP 6:65042667-65144908

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000287 ISS magnesium ion binding
GO:0001516 IEA prostaglandin biosynthetic process
GO:0004364 ISO glutathione transferase activity
GO:0004667 IDA prostaglandin-D synthase activity
GO:0005509 ISS calcium ion binding
GO:0005737 IEA cytoplasm
GO:0006693 IDA prostaglandin metabolic process
GO:0042803 IEA protein homodimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000163106 HPGDS hematopoietic prostaglandin D synthase protein_coding Homo_sapiens

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