C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coiled-coil domain containing 77
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030177 Ccdc77 10090 - 6:120324323-120364374 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000032283 Ccdc77-001 120324323-120357429 protein_coding
  ENSMUST00000112703 Ccdc77-002 120325035-120357472 protein_coding
  ENSMUST00000123114 Ccdc77-003 120337773-120357377 retained_intron
  ENSMUST00000127146 Ccdc77-005 120324323-120364374 nonsense_mediated_decay
  ENSMUST00000136829 Ccdc77-008 120334812-120357340 nonsense_mediated_decay
  ENSMUST00000137271 Ccdc77-004 120345302-120350390 retained_intron
  ENSMUST00000144131 Ccdc77-009 120331812-120357410 nonsense_mediated_decay
  ENSMUST00000146667 Ccdc77-006 120350208-120364356 protein_coding
  ENSMUST00000153435 Ccdc77-007 120353660-120357367 retained_intron
  ENSMUST00000163827 Ccdc77-010 120334779-120357367 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonLiverMuscleOvaryPlacentaTestisENSMUST00000032283ENSMUST00000137271
Transcript ID Adrenal Bladder Brain Breast Colon Liver Muscle Ovary Placenta Testis
ENSMUST00000032283 0.753±0.00 3.746±0.00 N/A N/A N/A 6.434±1.90 1.512±0.25 N/A 7.044±1.99 4.829±0.66
ENSMUST00000137271 0.990±0.22 N/A 4.373±0.00 1.312±0.14 1.261±0.00 2.910±0.12 N/A 1.983±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008AW CIL_0008AW_0002 VISTA 6:119874234-120475208
CIL_00083Y CIL_00083Y_0002 VISTA 6:120053928-120655330

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005813 IEA centrosome
GO:0008150 ND biological_process
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014432 ccdc77 coiled-coil domain containing 77 protein_coding Danio_rerio
ENSG00000120647 CCDC77 coiled-coil domain containing 77 protein_coding Homo_sapiens

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