C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: germ cell-specific gene 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030206 Gsg1 10090 - 6:135237329-135254351 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000087729 Gsg1-002 135237329-135247965 protein_coding
  ENSMUST00000111909 Gsg1-003 135237329-135254170 protein_coding
  ENSMUST00000111910 Gsg1-004 135237336-135254351 protein_coding
  ENSMUST00000111911 Gsg1-001 135237329-135254326 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000111909ENSMUST00000111910ENSMUST00000111911
Transcript ID Testis
ENSMUST00000111909 606.020±0.00
ENSMUST00000111910 483.395±21.20
ENSMUST00000111911 1092.384±409.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000DR CIL_0000DR_0002 CGP 6:135137519-135244955
CIL_0003H8 CIL_0003H8_0002 CGP 6:135197977-135254351

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005783 IDA endoplasmic reticulum
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0070063 IPI RNA polymerase binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000088738 GSG1 germ cell associated 1 protein_coding Danio_rerio
ENSG00000111305 GSG1 germ cell associated 1 protein_coding Homo_sapiens

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