C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: germ cell associated 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000111305 GSG1 9606 - 12:13083560-13103683 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000337630 GSG1-004 13083560-13095675 protein_coding
  ENST00000351606 GSG1-010 13084825-13103645 protein_coding
  ENST00000396302 GSG1-001 13084577-13095806 protein_coding
  ENST00000432710 GSG1-002 13084823-13103645 protein_coding
  ENST00000457134 GSG1-006 13084587-13095648 protein_coding
  ENST00000537302 GSG1-005 13084825-13095662 protein_coding
  ENST00000542415 GSG1-007 13087952-13103683 protein_coding
  ENST00000545401 GSG1-008 13087245-13103642 protein_coding
  ENST00000545699 GSG1-009 13088743-13095676 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000337630ENST00000351606ENST00000396302ENST00000432710ENST00000457134ENST00000537302ENST00000545699
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000337630 0.736±0.00 0.044±0.00 0.999±0.00 0.036±0.00 0.178±0.00 0.162±0.14 0.475±0.00 0.083±0.00 0.245±0.12 0.005±0.00 0.099±0.07 0.053±0.02 N/A
ENST00000351606 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.063±0.00 63.881±1.31
ENST00000396302 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.092±0.00 N/A N/A
ENST00000432710 N/A N/A 0.144±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.066±0.00 46.776±7.56
ENST00000457134 N/A N/A N/A N/A N/A N/A N/A 0.070±0.00 N/A N/A 0.150±0.00 0.095±0.00 N/A
ENST00000537302 N/A N/A N/A N/A 0.046±0.00 N/A N/A N/A N/A N/A 0.174±0.00 N/A 155.620±0.00
ENST00000545699 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.083±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000DR CIL_0000DR_0001 CGP 12:12974864-13142521
CIL_0003H8 CIL_0003H8_0001 CGP 12:13044284-13142521

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0016021 IEA integral component of membrane
GO:0070063 IEA RNA polymerase binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000088738 GSG1 germ cell associated 1 protein_coding Danio_rerio
ENSMUSG00000030206 Gsg1 germ cell-specific gene 1 protein_coding Mus_musculus

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