C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: C-type lectin domain family 2, member i
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030365 Clec2i 10090 + 6:128887588-128898167 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000032519 Clec2i-002 128887588-128896863 protein_coding
  ENSMUST00000159080 Clec2i-005 128887589-128897897 retained_intron
  ENSMUST00000159866 Clec2i-001 128887588-128898167 protein_coding
  ENSMUST00000160867 Clec2i-004 128887598-128896863 processed_transcript
  ENSMUST00000162666 Clec2i-003 128887598-128896863 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032519ENSMUST00000159080ENSMUST00000159866ENSMUST00000160867ENSMUST00000162666
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032519 0.347±0.00 N/A 0.265±0.00 N/A N/A 0.144±0.00 N/A 0.309±0.00 0.081±0.00 0.391±0.08 N/A 0.215±0.10 0.059±0.03 N/A
ENSMUST00000159080 0.190±0.04 N/A 0.116±0.00 0.009±0.00 0.781±0.33 0.127±0.05 0.046±0.00 0.092±0.04 0.058±0.04 0.424±0.13 0.147±0.12 0.106±0.02 0.045±0.02 N/A
ENSMUST00000159866 N/A N/A N/A N/A N/A 0.167±0.08 0.113±0.06 0.088±0.04 0.078±0.03 N/A 0.066±0.07 0.101±0.06 0.050±0.01 0.025±0.02
ENSMUST00000160867 0.331±0.08 0.150±0.00 N/A 0.019±0.00 1.316±0.00 0.207±0.10 0.110±0.00 0.089±0.02 0.047±0.01 0.516±0.00 0.071±0.00 0.285±0.11 N/A 0.038±0.02
ENSMUST00000162666 0.298±0.00 N/A N/A N/A 1.082±0.14 N/A N/A N/A 0.088±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001765 NAS membrane raft assembly
GO:0004888 ISS transmembrane signaling receptor activity
GO:0005515 IPI protein binding
GO:0009897 IDA external side of plasma membrane
GO:0009986 IDA cell surface
GO:0016021 IEA integral component of membrane
GO:0030246 ISS carbohydrate binding
GO:0030833 IMP regulation of actin filament polymerization
GO:0042129 IMP regulation of T cell proliferation
GO:0043113 IMP receptor clustering
GO:0045076 IMP regulation of interleukin-2 biosynthetic process
GO:0045671 NAS negative regulation of osteoclast differentiation
GO:0046703 IDA natural killer cell lectin-like receptor binding
GO:0050852 IMP T cell receptor signaling pathway
GO:2000522 NAS positive regulation of immunological synapse formation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000069493 CLEC2D C-type lectin domain family 2, member D protein_coding Homo_sapiens
ENSG00000188393 CLEC2A C-type lectin domain family 2, member A protein_coding Homo_sapiens

Loading