C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA C230052I12 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030493 C230052I12Rik 10090 - 7:35392275-35396817 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000032704 C230052I12Rik-001 35392275-35396817 protein_coding
  ENSMUST00000141001 C230052I12Rik-002 35392305-35396713 retained_intron
  ENSMUST00000154597 C230052I12Rik-003 35392696-35396708 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032704ENSMUST00000141001ENSMUST00000154597
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032704 2.959±0.64 1.325±0.59 2.449±0.17 2.464±1.13 3.171±0.97 0.820±0.15 2.748±0.21 4.130±3.17 2.533±0.25 0.304±0.12 3.208±0.49 5.116±1.82 1.878±0.62
ENSMUST00000141001 N/A 2.244±0.99 N/A N/A 2.681±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154597 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.386±0.00 N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 ISS chromatin binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006281 IEA DNA repair
GO:0008150 ND biological_process
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0043240 ISS Fanconi anaemia nuclear complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000051731 C25H19orf40 chromosome 19 open reading frame 40 protein_coding Danio_rerio
ENSG00000131944 C19orf40 chromosome 19 open reading frame 40 protein_coding Homo_sapiens

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