C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: developing brain homeobox 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030507 Dbx1 10090 - 7:49631499-49636849 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000032717 Dbx1-001 49631499-49636849 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastLiverMuscleOvaryPlacentaTestisENSMUST00000032717
Transcript ID Brain Breast Liver Muscle Ovary Placenta Testis
ENSMUST00000032717 2.715±1.96 0.015±0.00 0.023±0.02 0.016±0.00 0.025±0.00 0.077±0.05 0.013±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004AW CIL_0004AW_0003 CGP 7:48908716-49636849
CIL_0004AP CIL_0004AP_0003 CGP 7:49631499-49773999

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0006357 IMP regulation of transcription from RNA polymerase II promoter
GO:0021521 IMP ventral spinal cord interneuron specification
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000001859 dbx1b developing brain homeobox 1b protein_coding Danio_rerio
ENSDARG00000086393 dbx1a developing brain homeobox 1a protein_coding Danio_rerio
ENSG00000109851 DBX1 developing brain homeobox 1 protein_coding Homo_sapiens

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