C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 189, member A1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030518 Fam189a1 10090 - 7:64756113-65156570 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000119118 Fam189a1-001 64756113-65156570 protein_coding
  ENSMUST00000133883 Fam189a1-005 64756113-64773652 processed_transcript
  ENSMUST00000144535 Fam189a1-004 64819765-64856397 retained_intron
  ENSMUST00000148459 Fam189a1-002 64786690-65156416 protein_coding
  ENSMUST00000149851 Fam189a1-003 64767723-64925560 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000119118ENSMUST00000133883ENSMUST00000144535ENSMUST00000148459ENSMUST00000149851
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000119118 0.255±0.00 0.071±0.00 0.008±0.00 7.427±4.53 0.026±0.00 0.415±0.10 0.023±0.00 0.011±0.00 0.029±0.03 0.319±0.07 N/A 0.687±0.32 0.054±0.00 0.120±0.00
ENSMUST00000133883 0.007±0.00 0.210±0.04 N/A N/A 0.030±0.02 N/A 0.032±0.02 0.014±0.00 0.078±0.07 N/A 0.032±0.00 0.123±0.01 0.149±0.15 N/A
ENSMUST00000144535 N/A N/A N/A N/A 0.322±0.00 N/A N/A 0.100±0.00 N/A N/A N/A N/A 0.112±0.00 N/A
ENSMUST00000148459 N/A 0.260±0.00 N/A N/A N/A N/A N/A 0.039±0.01 0.098±0.00 0.480±0.10 N/A 1.181±0.27 N/A N/A
ENSMUST00000149851 N/A 0.442±0.11 0.055±0.00 N/A 0.117±0.09 2.918±0.47 0.208±0.12 0.061±0.03 0.025±0.00 0.636±0.00 N/A 1.642±0.57 0.030±0.00 0.288±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006HE CIL_0006HE_0002 CGP 7:64501706-65156570

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000053380 fam189a1 family with sequence similarity 189, member A1 protein_coding Danio_rerio
ENSG00000104059 FAM189A1 family with sequence similarity 189, member A1 protein_coding Homo_sapiens

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