C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Rhesus blood group-associated C glycoprotein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030549 Rhcg 10090 - 7:79593363-79617657 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000032766 Rhcg-001 79593363-79617657 protein_coding
  ENSMUST00000161084 Rhcg-002 79603766-79607874 protein_coding
  ENSMUST00000172788 Rhcg-003 79593369-79594924 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032766ENSMUST00000161084ENSMUST00000172788
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032766 0.065±0.03 3.674±2.69 0.181±0.00 0.079±0.00 0.034±0.01 0.012±0.00 74.793±6.32 0.045±0.04 0.014±0.00 N/A 0.273±0.19 0.067±0.06 17.137±6.16
ENSMUST00000161084 N/A N/A N/A N/A N/A 0.194±0.00 N/A 0.046±0.00 N/A 0.101±0.00 0.112±0.00 N/A N/A
ENSMUST00000172788 N/A N/A 0.294±0.00 N/A N/A N/A N/A N/A N/A N/A 0.128±0.06 0.300±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002R9 CIL_0002R9_0003 CGP 7:79448791-79617657
CIL_00011D CIL_00011D_0002 CGP 7:79593363-79698134

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005886 IDA plasma membrane
GO:0005887 IEA integral component of plasma membrane
GO:0006873 IEA cellular ion homeostasis
GO:0006885 IMP regulation of pH
GO:0008519 IDA ammonium transmembrane transporter activity
GO:0015696 IDA ammonium transport
GO:0016323 IEA basolateral plasma membrane
GO:0016324 IDA apical plasma membrane
GO:0030506 IEA ankyrin binding
GO:0070062 IEA extracellular vesicular exosome
GO:0070634 IEA transepithelial ammonium transport
GO:0072488 IEA ammonium transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003203 rhcga Rhesus blood group, C glycoprotein a protein_coding Danio_rerio
ENSDARG00000007080 rhcgl1 Rhesus blood group, C glycoprotein, like 1 protein_coding Danio_rerio
ENSDARG00000029066 rhcgb Rhesus blood group, C glycoprotein b protein_coding Danio_rerio
ENSG00000140519 RHCG Rh family, C glycoprotein protein_coding Homo_sapiens

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