C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00011D_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000140519-ENSG00000140534 CGP 9606 15:89471398-89631056
GeneTranscriptPositionBiotype
ENSG00000140519 (RHCG)
Rh family, C glycoprotein 		ENST00000268122 (RHCG-001) 89471407-89496613 protein_coding
ENST00000558030 (RHCG-007) 89471757-89496582 nonsense_mediated_decay
ENST00000558184 (RHCG-002) 89477728-89496589 nonsense_mediated_decay
ENST00000558360 (RHCG-005) 89471445-89479430 protein_coding
ENST00000559638 (RHCG-004) 89477799-89479736 retained_intron
ENST00000560081 (RHCG-003) 89471398-89496571 nonsense_mediated_decay
ENSG00000140534 (TICRR)
TOPBP1-interacting checkpoint and replication regulator 		ENST00000268138 (TICRR-001) 89575482-89628023 protein_coding
ENST00000560985 (TICRR-003) 89575587-89628012 protein_coding
ENST00000561095 (TICRR-002) 89625400-89631056 nonsense_mediated_decay
ENSG00000166813 (KIF7)
kinesin family member 7 		ENST00000394412 (KIF7-001) 89627977-89655451 protein_coding
ENST00000445906 (KIF7-002) 89648503-89655451 nonsense_mediated_decay
ENST00000558928 (KIF7-003) 89608789-89628780 processed_transcript
ENSG00000259218 (LINC00928)
long intergenic non-protein coding RNA 928 		ENST00000559227 (LINC00928-002) 89514588-89524016 lincRNA
ENST00000559967 (LINC00928-004) 89505278-89523753 lincRNA
ENST00000561108 (LINC00928-003) 89505277-89523753 lincRNA
ENST00000561201 (LINC00928-001) 89505277-89524034 lincRNA
ENSG00000259615 (RP11-429B14.3)
 ENST00000560477 (RP11-429B14.3-001) 89579765-89582297 antisense
ENSG00000259713 (RP11-429B14.1)
 ENST00000559041 (RP11-429B14.1-001) 89518523-89591956 sense_overlapping
ENSG00000261478 (RP11-429B14.4)
 ENST00000567484 (RP11-429B14.4-001) 89508961-89510416 lincRNA
CIL_00011D_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030549-ENSMUSG00000046591 CGP 10090 7:79593363-79698134
GeneTranscriptPositionBiotype
ENSMUSG00000030549 (Rhcg)
Rhesus blood group-associated C glycoprotein 		ENSMUST00000032766 (Rhcg-001) 79593363-79617657 protein_coding
ENSMUST00000161084 (Rhcg-002) 79603766-79607874 protein_coding
ENSMUST00000172788 (Rhcg-003) 79593369-79594924 protein_coding
ENSMUSG00000046591 (Ticrr)
TOPBP1-interacting checkpoint and replication regulator 		ENSMUST00000035977 (Ticrr-201) 79660196-79698134 protein_coding
ENSMUSG00000050382 (Kif7)
kinesin family member 7 		ENSMUST00000059836 (Kif7-201) 79698099-79714186 protein_coding
ENSMUST00000178048 (Kif7-202) 79698099-79714186 protein_coding
ENSMUST00000183846 (Kif7-001) 79698098-79715720 protein_coding
ENSMUST00000184137 (Kif7-002) 79698528-79715669 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00011D_0001ENSG00000140519ENST00000268122ENST00000558030ENST00000558184ENST00000558360ENST00000559638ENST00000560081ENSG00000140534ENST00000268138ENST00000560985ENST00000561095ENSG00000166813ENST00000394412ENST00000445906ENST00000558928ENSG00000259218ENST00000559227ENST00000559967ENST00000561108ENST00000561201ENSG00000259615ENST00000560477ENSG00000259713ENST00000559041ENSG00000261478ENST00000567484CIL_00011D_0002ENSMUSG00000030549ENSMUST00000032766ENSMUST00000161084ENSMUST00000172788ENSMUSG00000046591ENSMUST00000035977ENSMUSG00000050382ENSMUST00000059836ENSMUST00000178048ENSMUST00000183846ENSMUST00000184137
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00011D_0001ENSG00000140519ENST00000268122ENST00000558030ENST00000558184ENST00000558360ENST00000560081ENSG00000140534ENST00000268138ENST00000560985ENST00000561095ENSG00000166813ENST00000394412ENST00000445906ENSG00000259218ENST00000559227ENST00000559967ENST00000561108ENSG00000259615ENST00000560477ENSG00000259713ENST00000559041ENSG00000261478ENST00000567484CIL_00011D_0002ENSMUSG00000030549ENSMUST00000032766ENSMUST00000161084ENSMUST00000172788ENSMUSG00000046591ENSMUST00000035977ENSMUSG00000050382ENSMUST00000059836ENSMUST00000178048ENSMUST00000183846ENSMUST00000184137
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000140519 ENST00000268122 0.587±0.00 N/A 3.290±0.00 0.974±0.00 N/A N/A N/A 29.343±0.00 N/A N/A N/A 20.010±12.28 0.066±0.00 N/A
ENST00000558030 N/A N/A 1.687±0.00 N/A N/A N/A 0.070±0.00 N/A N/A N/A N/A 35.913±0.00 N/A 1.321±0.00
ENST00000558184 N/A N/A N/A N/A 0.045±0.00 N/A N/A N/A N/A N/A N/A N/A 0.124±0.01 N/A
ENST00000558360 N/A N/A N/A N/A 0.254±0.00 0.064±0.00 0.012±0.00 13.820±0.00 0.139±0.00 0.193±0.00 N/A 57.023±0.00 0.232±0.00 0.465±0.23
ENST00000559638 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560081 N/A N/A N/A N/A 0.071±0.00 N/A N/A 13.194±0.00 N/A N/A N/A 5.477±0.00 N/A 0.400±0.12
ENSG00000140534 ENST00000268138 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.512±0.07 0.377±0.12 N/A
ENST00000560985 0.207±0.00 0.478±0.00 N/A 0.064±0.04 0.144±0.00 0.488±0.00 0.047±0.01 N/A 0.063±0.05 0.053±0.00 N/A 0.475±0.07 0.269±0.11 1.057±0.08
ENST00000561095 N/A N/A 0.051±0.00 0.112±0.00 N/A N/A N/A 0.174±0.00 N/A 0.144±0.00 N/A 1.719±0.00 0.347±0.00 0.998±0.00
ENSG00000166813 ENST00000394412 2.504±0.00 3.194±0.00 N/A 0.217±0.05 2.000±0.00 3.060±0.00 1.099±0.00 0.650±0.62 0.211±0.00 0.832±0.00 0.186±0.14 3.270±3.67 1.181±0.15 1.890±0.95
ENST00000445906 N/A N/A N/A N/A N/A N/A N/A N/A 0.200±0.00 0.297±0.00 N/A N/A N/A N/A
ENST00000558928 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000259218 ENST00000559227 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.040±0.00 N/A 0.087±0.00
ENST00000559967 N/A N/A N/A N/A 0.064±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561108 N/A N/A N/A 0.101±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.502±0.27
ENST00000561201 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000259615 ENST00000560477 0.088±0.00 0.232±0.00 N/A 0.394±0.00 0.227±0.00 0.133±0.00 N/A 0.261±0.00 N/A 0.508±0.00 N/A 0.089±0.03 N/A 0.111±0.05
ENSG00000259713 ENST00000559041 0.208±0.00 0.479±0.00 N/A 0.341±0.00 0.433±0.08 0.158±0.00 0.152±0.00 0.326±0.00 0.089±0.00 0.174±0.00 0.164±0.00 0.049±0.00 N/A 0.179±0.08
ENSG00000261478 ENST00000567484 N/A N/A N/A 0.301±0.28 N/A 0.024±0.00 N/A N/A N/A 0.032±0.00 N/A N/A 0.023±0.00 0.092±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030549 ENSMUST00000032766 0.065±0.03 3.674±2.69 N/A 0.181±0.00 0.079±0.00 0.034±0.01 0.012±0.00 74.793±6.32 0.045±0.04 0.014±0.00 N/A 0.273±0.19 0.067±0.06 17.137±6.16
ENSMUST00000161084 N/A N/A N/A N/A N/A N/A 0.194±0.00 N/A 0.046±0.00 N/A 0.101±0.00 0.112±0.00 N/A N/A
ENSMUST00000172788 N/A N/A N/A 0.294±0.00 N/A N/A N/A N/A N/A N/A N/A 0.128±0.06 0.300±0.00 N/A
ENSMUSG00000046591 ENSMUST00000035977 0.603±0.03 0.184±0.00 N/A 1.086±0.15 0.193±0.07 0.745±0.18 N/A 0.031±0.00 1.615±1.50 N/A 0.015±0.01 1.469±0.25 1.746±0.96 1.047±0.15
ENSMUSG00000050382 ENSMUST00000059836 N/A N/A N/A N/A 0.153±0.00 N/A N/A 0.107±0.00 N/A N/A 0.124±0.07 N/A N/A N/A
ENSMUST00000178048 0.281±0.00 N/A N/A 0.964±0.00 0.140±0.00 0.592±0.00 N/A 0.247±0.00 N/A N/A 0.071±0.08 1.863±0.00 0.340±0.00 N/A
ENSMUST00000183846 1.265±0.60 1.839±0.23 1.429±0.02 1.529±0.30 0.665±0.41 0.368±0.19 0.099±0.00 0.265±0.11 0.127±0.07 1.139±0.32 N/A 3.035±0.97 0.407±0.00 N/A
ENSMUST00000184137 N/A 0.678±0.37 N/A N/A N/A 0.226±0.01 0.185±0.00 0.113±0.03 0.069±0.00 N/A 0.128±0.00 5.261±0.00 0.521±0.00 N/A

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