C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 7 (cationic amino acid transporter, y+ system), member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031297 Slc7a3 10090 - X:101079210-101086020 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000073927 Slc7a3-201 101079222-101085372 protein_coding
  ENSMUST00000101362 Slc7a3-002 101079221-101085352 protein_coding
  ENSMUST00000113710 Slc7a3-001 101079222-101086020 protein_coding
  ENSMUST00000126282 Slc7a3-006 101079806-101084181 processed_transcript
  ENSMUST00000138162 Slc7a3-003 101079210-101085405 retained_intron
  ENSMUST00000144410 Slc7a3-005 101081570-101082233 retained_intron
  ENSMUST00000151922 Slc7a3-004 101081758-101082459 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000073927ENSMUST00000101362ENSMUST00000113710ENSMUST00000126282ENSMUST00000138162ENSMUST00000144410ENSMUST00000151922
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000073927 0.188±0.00 0.213±0.08 0.769±0.22 0.845±0.24 0.204±0.08 0.332±0.15 0.139±0.04 0.239±0.16 0.218±0.22 0.298±0.15 0.039±0.02 0.817±0.30 1.438±0.30 N/A
ENSMUST00000101362 0.270±0.08 N/A 0.422±0.00 0.272±0.00 N/A N/A N/A N/A 0.207±0.07 0.462±0.00 N/A N/A 0.243±0.04 N/A
ENSMUST00000113710 0.116±0.06 0.161±0.02 0.213±0.00 0.399±0.21 N/A N/A 0.050±0.00 N/A 0.075±0.01 0.077±0.00 0.040±0.00 0.420±0.16 0.300±0.16 0.080±0.03
ENSMUST00000126282 N/A 0.503±0.28 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.354±0.45 N/A N/A
ENSMUST00000138162 0.063±0.00 0.072±0.00 N/A 0.277±0.01 0.100±0.00 0.088±0.00 0.050±0.00 0.104±0.05 0.063±0.00 0.095±0.00 0.030±0.00 0.208±0.07 0.248±0.22 0.069±0.02
ENSMUST00000144410 N/A 0.416±0.22 N/A N/A N/A N/A N/A N/A 0.074±0.00 N/A N/A N/A N/A 0.439±0.01
ENSMUST00000151922 N/A 0.594±0.00 N/A N/A N/A 0.413±0.00 N/A N/A N/A 0.343±0.03 0.099±0.01 0.846±0.17 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000099 CIL_000099_0002 CGP X:100838648-101086020
CIL_0002B5 CIL_0002B5_0002 CGP X:101079210-101222563

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005886 IEA plasma membrane
GO:0015174 IDA basic amino acid transmembrane transporter activity
GO:0015181 IDA arginine transmembrane transporter activity
GO:0015189 IDA L-lysine transmembrane transporter activity
GO:0015809 IDA arginine transport
GO:0015819 IDA lysine transport
GO:0016021 IEA integral component of membrane
GO:1902475 IEA L-alpha-amino acid transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020645 slc7a3a solute carrier family 7 (cationic amino acid transporter, y+ system), member 3a protein_coding Danio_rerio
ENSDARG00000061566 SLC7A3 (2 of 2) solute carrier family 7 (cationic amino acid transporter, y+ system), member 3 protein_coding Danio_rerio
ENSG00000165349 SLC7A3 solute carrier family 7 (cationic amino acid transporter, y+ system), member 3 protein_coding Homo_sapiens

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