C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031370 Zrsr2 10090 - X:163935443-163958661 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000090840 Zrsr2-002 163950386-163958598 protein_coding
  ENSMUST00000112289 Zrsr2-001 163935443-163958589 protein_coding
  ENSMUST00000124719 Zrsr2-006 163948939-163950458 retained_intron
  ENSMUST00000127370 Zrsr2-005 163956472-163958661 protein_coding
  ENSMUST00000132350 Zrsr2-008 163939065-163950216 retained_intron
  ENSMUST00000139166 Zrsr2-003 163953591-163958162 processed_transcript
  ENSMUST00000145962 Zrsr2-007 163939968-163943476 retained_intron
  ENSMUST00000147928 Zrsr2-004 163953640-163958552 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000090840ENSMUST00000112289ENSMUST00000127370ENSMUST00000132350ENSMUST00000139166
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000090840 0.898±0.19 2.188±0.24 2.181±0.12 3.767±0.59 1.470±0.33 1.831±0.90 0.316±0.09 1.125±0.23 1.289±0.66 2.118±0.00 0.593±0.13 1.821±0.61 3.178±1.32 0.574±0.14
ENSMUST00000112289 0.715±0.04 1.257±0.10 2.412±0.14 1.507±0.16 1.040±0.06 1.011±0.23 0.476±0.03 0.897±0.13 1.506±0.97 1.340±0.15 1.897±0.37 1.815±1.05 2.446±0.66 0.272±0.10
ENSMUST00000127370 N/A N/A N/A N/A 3.732±0.00 6.864±1.78 N/A N/A 2.344±0.14 N/A N/A 4.882±0.64 N/A 2.108±0.39
ENSMUST00000132350 N/A N/A N/A N/A N/A N/A 0.940±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139166 N/A N/A N/A 36.235±0.00 N/A N/A N/A N/A N/A N/A N/A 57.005±0.00 61.573±40.59 46.716±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006PF CIL_0006PF_0002 CGP X:163909017-163958661

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003723 IEA RNA binding
GO:0005730 IDA nucleolus
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058448 zrsr2 zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2 protein_coding Danio_rerio
ENSG00000169249 ZRSR2 zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2 protein_coding Homo_sapiens
ENSG00000212643 ZRSR1 zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 1 protein_coding Homo_sapiens

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