C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: carbohydrate kinase domain containing
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031505 Carkd 10090 + 8:11497506-11514960 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000033901 Carkd-002 11497568-11513287 protein_coding
  ENSMUST00000177955 Carkd-001 11497506-11513287 protein_coding
  ENSMUST00000178364 Carkd-004 11497593-11507070 retained_intron
  ENSMUST00000178382 Carkd-006 11509962-11513267 retained_intron
  ENSMUST00000178721 Carkd-007 11497584-11513287 protein_coding
  ENSMUST00000178817 Carkd-003 11497567-11514960 nonsense_mediated_decay
  ENSMUST00000180269 Carkd-005 11497633-11510236 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033901ENSMUST00000177955ENSMUST00000178364ENSMUST00000178382ENSMUST00000178721
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033901 27.995±2.10 38.411±7.54 21.928±9.78 11.741±5.89 26.946±5.96 19.018±3.66 N/A 15.254±5.43 22.607±10.89 32.370±6.81 3.509±0.39 42.284±11.55 9.805±3.20 14.935±5.82
ENSMUST00000177955 N/A N/A 34.395±5.94 20.721±11.34 22.695±1.63 21.695±0.00 10.321±0.00 22.885±10.15 9.993±3.38 N/A 11.957±4.64 22.070±7.81 18.443±3.59 8.308±0.74
ENSMUST00000178364 N/A N/A N/A 7.999±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.681±0.00
ENSMUST00000178382 N/A N/A N/A N/A 17.607±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000178721 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.338±0.00 10.018±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00058H CIL_00058H_0003 CGP 8:11453392-11514960
CIL_0001JQ CIL_0001JQ_0002 CGP 8:11497506-11550771

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0008150 ND biological_process
GO:0046496 IEA nicotinamide nucleotide metabolic process
GO:0047453 IEA ATP-dependent NAD(P)H-hydrate dehydratase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077119 CARKD carbohydrate kinase domain containing protein_coding Danio_rerio
ENSG00000213995 CARKD carbohydrate kinase domain containing protein_coding Homo_sapiens

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