C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00058H_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000005049-ENSDARG00000077119 CGP 7955 9:8943700-8979643
GeneTranscriptPositionBiotype
ENSDARG00000005049 (rab20)
RAB20, member RAS oncogene family 		ENSDART00000138527 (rab20-001) 8943700-8951415 protein_coding
ENSDART00000144673 (rab20-002) 8944161-8951302 protein_coding
ENSDARG00000077119 (CARKD)
carbohydrate kinase domain containing 		ENSDART00000111214 (CARKD-202) 8954521-8979153 protein_coding
ENSDART00000130208 (CARKD-201) 8955176-8979641 protein_coding
ENSDART00000132068 (CARKD-001) 8950960-8956232 protein_coding
ENSDART00000132443 (CARKD-007) 8954532-8966248 protein_coding
ENSDART00000134954 (CARKD-002) 8954196-8974785 protein_coding
ENSDART00000139687 (CARKD-006) 8954532-8960216 protein_coding
ENSDART00000140232 (CARKD-005) 8954524-8966324 protein_coding
ENSDART00000143671 (CARKD-003) 8954216-8960231 protein_coding
ENSDART00000147098 (CARKD-004) 8954249-8979643 protein_coding
ENSDART00000147820 (CARKD-008) 8955007-8956152 protein_coding
CIL_00058H_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000139832-ENSG00000213995 CGP 9606 13:110523066-110639993
GeneTranscriptPositionBiotype
ENSG00000139832 (RAB20)
RAB20, member RAS oncogene family 		ENST00000267328 (RAB20-001) 110523066-110561733 protein_coding
ENSG00000213995 (CARKD)
carbohydrate kinase domain containing 		ENST00000309957 (CARKD-001) 110615661-110639993 protein_coding
ENST00000424185 (CARKD-201) 110615460-110639993 protein_coding
ENST00000458711 (CARKD-202) 110615584-110639993 protein_coding
ENST00000470164 (CARKD-003) 110615591-110639993 processed_transcript
CIL_00058H_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031504-ENSMUSG00000031505 CGP 10090 8:11453392-11514960
GeneTranscriptPositionBiotype
ENSMUSG00000031504 (Rab20)
RAB20, member RAS oncogene family 		ENSMUST00000033900 (Rab20-201) 11453392-11478638 protein_coding
ENSMUSG00000031505 (Carkd)
carbohydrate kinase domain containing 		ENSMUST00000033901 (Carkd-002) 11497568-11513287 protein_coding
ENSMUST00000177955 (Carkd-001) 11497506-11513287 protein_coding
ENSMUST00000178364 (Carkd-004) 11497593-11507070 retained_intron
ENSMUST00000178382 (Carkd-006) 11509962-11513267 retained_intron
ENSMUST00000178721 (Carkd-007) 11497584-11513287 protein_coding
ENSMUST00000178817 (Carkd-003) 11497567-11514960 nonsense_mediated_decay
ENSMUST00000180269 (Carkd-005) 11497633-11510236 retained_intron
ENSMUSG00000056228 (Cars2)
cysteinyl-tRNA synthetase 2 (mitochondrial)(putative) 		ENSMUST00000049461 (Cars2-201) 11514021-11550771 protein_coding
ENSMUSG00000096957 (E230013L22Rik)
RIKEN cDNA E230013L22 gene 		ENSMUST00000180408 (E230013L22Rik-201) 11477929-11480241 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00058H_0001ENSDARG00000005049ENSDART00000138527ENSDART00000144673ENSDARG00000077119ENSDART00000111214ENSDART00000130208ENSDART00000132068ENSDART00000132443ENSDART00000134954ENSDART00000139687ENSDART00000140232ENSDART00000143671ENSDART00000147098ENSDART00000147820CIL_00058H_0002ENSG00000139832ENST00000267328ENSG00000213995ENST00000309957ENST00000424185ENST00000458711ENST00000470164CIL_00058H_0003ENSMUSG00000031504ENSMUST00000033900ENSMUSG00000031505ENSMUST00000033901ENSMUST00000177955ENSMUST00000178364ENSMUST00000178382ENSMUST00000178721ENSMUST00000178817ENSMUST00000180269ENSMUSG00000056228ENSMUST00000049461ENSMUSG00000096957ENSMUST00000180408
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00058H_0001ENSDARG00000005049ENSDART00000138527ENSDARG00000077119ENSDART00000111214ENSDART00000130208ENSDART00000134954ENSDART00000147098ENSDART00000147820CIL_00058H_0002ENSG00000139832ENST00000267328ENSG00000213995ENST00000309957ENST00000424185ENST00000458711ENST00000470164CIL_00058H_0003ENSMUSG00000031504ENSMUST00000033900ENSMUSG00000031505ENSMUST00000033901ENSMUST00000177955ENSMUST00000178364ENSMUST00000178382ENSMUST00000178721ENSMUSG00000056228ENSMUST00000049461ENSMUSG00000096957ENSMUST00000180408
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000005049 ENSDART00000138527 N/A N/A N/A N/A N/A N/A 8.460±1.18 18.666±10.31 1.688±0.00 N/A 1.978±0.00 N/A N/A N/A
ENSDART00000144673 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000077119 ENSDART00000111214 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.142±0.00 N/A N/A N/A
ENSDART00000130208 N/A N/A N/A 10.485±0.00 N/A N/A 2.693±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000132068 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000132443 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000134954 N/A N/A N/A N/A N/A N/A N/A N/A 1.641±0.00 N/A N/A N/A N/A N/A
ENSDART00000139687 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000140232 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000143671 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000147098 N/A N/A N/A 13.235±1.87 N/A N/A 4.482±2.10 10.080±1.64 1.441±0.00 N/A 1.766±0.00 N/A N/A N/A
ENSDART00000147820 N/A N/A N/A 11.710±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000139832 ENST00000267328 18.119±0.00 12.187±0.00 1.014±0.00 1.490±1.25 6.636±3.53 5.195±3.35 2.461±1.98 9.192±5.83 9.710±8.67 10.729±6.79 1.278±1.15 14.293±6.53 13.686±2.06 7.919±0.63
ENSG00000213995 ENST00000309957 1.150±0.00 N/A N/A N/A N/A 2.512±0.00 0.991±0.00 0.971±0.00 N/A N/A N/A 5.479±0.36 3.333±0.00 N/A
ENST00000424185 3.564±0.00 7.821±0.00 N/A 7.194±0.00 2.982±1.94 7.819±0.00 N/A 5.896±0.00 10.586±0.00 6.591±0.00 1.598±0.00 8.001±5.00 4.254±0.87 10.498±0.00
ENST00000458711 2.811±0.00 4.154±0.00 N/A 12.590±0.00 4.012±0.00 3.370±2.13 3.545±0.00 7.901±4.62 7.999±0.00 4.712±0.00 2.345±0.15 5.784±2.67 9.620±2.01 11.761±1.72
ENST00000470164 1.526±0.00 N/A 1.561±0.00 8.628±0.00 1.646±0.00 0.854±0.00 2.664±0.00 3.337±0.00 N/A 1.345±0.84 N/A 5.869±0.83 3.175±0.00 5.388±1.08
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031504 ENSMUST00000033900 2.740±1.98 7.519±1.31 6.339±1.75 0.147±0.06 5.822±0.48 14.665±0.66 12.329±3.71 7.217±2.02 3.682±2.96 4.724±3.45 1.174±0.17 9.371±5.82 6.553±2.71 5.570±2.67
ENSMUSG00000031505 ENSMUST00000033901 27.995±2.10 38.411±7.54 21.928±9.78 11.741±5.89 26.946±5.96 19.018±3.66 N/A 15.254±5.43 22.607±10.89 32.370±6.81 3.509±0.39 42.284±11.55 9.805±3.20 14.935±5.82
ENSMUST00000177955 N/A N/A 34.395±5.94 20.721±11.34 22.695±1.63 21.695±0.00 10.321±0.00 22.885±10.15 9.993±3.38 N/A 11.957±4.64 22.070±7.81 18.443±3.59 8.308±0.74
ENSMUST00000178364 N/A N/A N/A 7.999±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.681±0.00
ENSMUST00000178382 N/A N/A N/A N/A 17.607±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000178721 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.338±0.00 10.018±0.00 N/A
ENSMUST00000178817 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000180269 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000056228 ENSMUST00000049461 15.394±2.50 25.608±7.84 7.778±0.00 11.627±4.51 17.096±3.70 21.182±1.72 11.947±2.38 19.140±3.56 11.862±1.98 14.197±2.11 6.807±2.04 19.672±7.39 8.908±2.55 7.071±2.39
ENSMUSG00000096957 ENSMUST00000180408 1.037±0.61 1.352±0.67 3.306±0.68 0.045±0.02 1.007±0.31 2.532±0.47 7.068±3.02 4.871±1.35 1.138±0.69 1.351±0.39 0.602±0.16 2.522±1.30 1.624±0.71 1.588±0.60

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