C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA D230025D16 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031889 D230025D16Rik 10090 + 8:105225145-105253053 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000034361 D230025D16Rik-001 105225145-105253053 protein_coding
  ENSMUST00000124113 D230025D16Rik-004 105225267-105253053 nonsense_mediated_decay
  ENSMUST00000132964 D230025D16Rik-006 105230968-105240039 protein_coding
  ENSMUST00000133035 D230025D16Rik-005 105246493-105251765 retained_intron
  ENSMUST00000141957 D230025D16Rik-003 105225206-105252756 nonsense_mediated_decay
  ENSMUST00000156561 D230025D16Rik-002 105225206-105251125 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034361ENSMUST00000141957ENSMUST00000156561
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034361 10.124±1.20 10.344±2.47 5.937±0.70 5.674±0.77 9.934±0.79 8.376±1.78 5.070±0.48 6.549±0.87 11.763±5.45 24.299±9.94 3.936±0.60 14.615±4.87 5.219±2.55 2.747±0.20
ENSMUST00000141957 4.267±0.00 4.746±0.90 4.818±0.91 5.108±0.34 N/A 3.331±0.00 1.743±0.00 2.630±0.65 5.364±1.35 8.084±0.00 3.479±0.61 6.702±1.36 6.509±1.80 1.015±0.50
ENSMUST00000156561 N/A N/A N/A 1.948±0.03 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005T2 CIL_0005T2_0002 CGP 8:105170674-105253053
CIL_0003M3 CIL_0003M3_0003 CGP 8:105225145-105255153

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041560 C18H16orf70 chromosome 16 open reading frame 70 protein_coding Danio_rerio
ENSG00000125149 C16orf70 chromosome 16 open reading frame 70 protein_coding Homo_sapiens

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