C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0003M3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000041560-ENSDARG00000041616 CGP 7955 18:17153027-17172722
GeneTranscriptPositionBiotype
ENSDARG00000041560 (C18H16orf70)
chromosome 16 open reading frame 70
ENSDART00000090754 (C18H16orf70-001) 17153027-17166178 protein_coding
ENSDARG00000041616 (b3gnt9)
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9
ENSDART00000060997 (b3gnt9-201) 17171448-17172722 protein_coding
ENSDART00000146725 (b3gnt9-001) 17171163-17172594 protein_coding
CIL_0003M3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000125149-ENSG00000237172 CGP 9606 16:67109958-67151214
GeneTranscriptPositionBiotype
ENSG00000125149 (C16orf70)
chromosome 16 open reading frame 70
ENST00000219139 (C16orf70-001) 67109988-67148539 protein_coding
ENST00000561683 (C16orf70-004) 67134772-67136310 processed_transcript
ENST00000563853 (C16orf70-012) 67109958-67144376 protein_coding
ENST00000565900 (C16orf70-005) 67131989-67132934 retained_intron
ENST00000566026 (C16orf70-009) 67110147-67134386 protein_coding
ENST00000567162 (C16orf70-011) 67139634-67144877 retained_intron
ENST00000569277 (C16orf70-013) 67146284-67147707 protein_coding
ENST00000569600 (C16orf70-002) 67109963-67147131 protein_coding
ENST00000569626 (C16orf70-003) 67120095-67136308 retained_intron
ENST00000569683 (C16orf70-008) 67110117-67134812 processed_transcript
ENST00000569914 (C16orf70-010) 67109962-67140074 protein_coding
ENSG00000237172 (B3GNT9)
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9
ENST00000449549 (B3GNT9-001) 67148105-67151214 protein_coding
CIL_0003M3_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031889-ENSMUSG00000069920 CGP 10090 8:105225145-105255153
GeneTranscriptPositionBiotype
ENSMUSG00000031889 (D230025D16Rik)
RIKEN cDNA D230025D16 gene
ENSMUST00000034361 (D230025D16Rik-001) 105225145-105253053 protein_coding
ENSMUST00000124113 (D230025D16Rik-004) 105225267-105253053 nonsense_mediated_decay
ENSMUST00000132964 (D230025D16Rik-006) 105230968-105240039 protein_coding
ENSMUST00000133035 (D230025D16Rik-005) 105246493-105251765 retained_intron
ENSMUST00000141957 (D230025D16Rik-003) 105225206-105252756 nonsense_mediated_decay
ENSMUST00000156561 (D230025D16Rik-002) 105225206-105251125 retained_intron
ENSMUSG00000069920 (B3gnt9)
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9
ENSMUST00000093217 (B3gnt9-201) 105252639-105255151 protein_coding
ENSMUST00000136822 (B3gnt9-001) 105252638-105255153 protein_coding
ENSMUST00000161745 (B3gnt9-002) 105254322-105255151 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003M3_0001ENSDARG00000041560ENSDART00000090754ENSDARG00000041616ENSDART00000060997ENSDART00000146725CIL_0003M3_0002ENSG00000125149ENST00000219139ENST00000561683ENST00000563853ENST00000565900ENST00000566026ENST00000567162ENST00000569277ENST00000569600ENST00000569626ENST00000569683ENST00000569914ENSG00000237172ENST00000449549CIL_0003M3_0003ENSMUSG00000031889ENSMUST00000034361ENSMUST00000124113ENSMUST00000132964ENSMUST00000133035ENSMUST00000141957ENSMUST00000156561ENSMUSG00000069920ENSMUST00000093217ENSMUST00000136822ENSMUST00000161745
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003M3_0001ENSDARG00000041560ENSDART00000090754ENSDARG00000041616ENSDART00000060997ENSDART00000146725CIL_0003M3_0002ENSG00000125149ENST00000219139ENST00000569600ENST00000569914ENSG00000237172ENST00000449549CIL_0003M3_0003ENSMUSG00000031889ENSMUST00000034361ENSMUST00000141957ENSMUST00000156561ENSMUSG00000069920ENSMUST00000093217ENSMUST00000136822ENSMUST00000161745
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000041560 ENSDART00000090754 N/A N/A N/A 2.832±0.62 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000041616 ENSDART00000060997 N/A N/A N/A 0.717±0.00 N/A N/A 0.227±0.00 N/A 0.046±0.00 N/A N/A N/A N/A N/A
ENSDART00000146725 N/A N/A N/A 0.424±0.00 N/A N/A N/A 0.183±0.00 N/A N/A 0.099±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000125149 ENST00000219139 N/A N/A N/A 2.384±0.00 N/A N/A N/A N/A N/A N/A N/A 2.838±0.00 N/A N/A
ENST00000561683 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563853 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565900 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566026 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567162 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569277 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569600 N/A N/A 1.042±0.00 N/A N/A N/A N/A N/A N/A 0.757±0.00 2.091±0.00 1.218±0.00 N/A N/A
ENST00000569626 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569683 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569914 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.779±0.00 4.644±0.00 7.060±0.00 9.086±0.00
ENSG00000237172 ENST00000449549 4.570±0.00 N/A 0.891±0.00 14.407±0.00 3.639±2.25 2.759±2.43 3.028±2.50 0.920±0.00 4.362±1.61 4.683±3.87 1.392±0.31 12.024±10.84 10.289±2.23 10.042±5.50
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031889 ENSMUST00000034361 10.124±1.20 10.344±2.47 5.937±0.70 5.674±0.77 9.934±0.79 8.376±1.78 5.070±0.48 6.549±0.87 11.763±5.45 24.299±9.94 3.936±0.60 14.615±4.87 5.219±2.55 2.747±0.20
ENSMUST00000124113 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132964 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133035 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141957 4.267±0.00 4.746±0.90 4.818±0.91 5.108±0.34 N/A 3.331±0.00 1.743±0.00 2.630±0.65 5.364±1.35 8.084±0.00 3.479±0.61 6.702±1.36 6.509±1.80 1.015±0.50
ENSMUST00000156561 N/A N/A N/A 1.948±0.03 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000069920 ENSMUST00000093217 13.367±4.91 3.915±1.80 13.589±0.92 3.458±0.13 11.462±1.79 10.103±3.71 4.945±0.49 4.791±0.52 4.841±1.85 21.056±4.17 2.054±0.50 13.425±5.50 4.348±2.28 3.325±1.46
ENSMUST00000136822 5.871±0.28 3.727±1.20 5.688±0.30 N/A 4.078±0.42 4.685±0.22 N/A N/A N/A 8.638±0.00 N/A 6.392±1.80 2.816±0.00 0.230±0.00
ENSMUST00000161745 N/A N/A N/A N/A N/A 5.322±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

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