C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: acyl-CoA synthetase bubblegum family member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032281 Acsbg1 10090 - 9:54604877-54661870 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000034822 Acsbg1-001 54604877-54661870 protein_coding
  ENSMUST00000128163 Acsbg1-003 54628547-54647346 protein_coding
  ENSMUST00000128624 Acsbg1-002 54628567-54661695 protein_coding
  ENSMUST00000132914 Acsbg1-005 54646183-54647217 retained_intron
  ENSMUST00000138315 Acsbg1-004 54628521-54643158 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034822ENSMUST00000128163ENSMUST00000138315
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034822 0.199±0.06 83.345±41.28 2.130±0.43 14.675±15.00 3.223±0.33 0.423±0.12 0.310±0.07 0.520±0.11 0.053±0.02 0.346±0.12 0.113±0.10 168.288±82.73 0.894±0.78 25.957±11.86
ENSMUST00000128163 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.137±0.00 N/A N/A N/A
ENSMUST00000138315 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.214±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007YR CIL_0007YR_0002 VISTA 9:54035032-54637557
CIL_0003NR CIL_0003NR_0003 CGP 9:54586511-54661870
CIL_0003TL CIL_0003TL_0002 CGP 9:54604877-54716315

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000038 ISS very long-chain fatty acid metabolic process
GO:0001552 IEA ovarian follicle atresia
GO:0001676 ISS long-chain fatty acid metabolic process
GO:0004467 ISS long-chain fatty acid-CoA ligase activity
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0031410 IEA cytoplasmic vesicle
GO:0031957 ISS very long-chain fatty acid-CoA ligase activity
GO:0051384 IMP response to glucocorticoid

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062077 acsbg1 acyl-CoA synthetase bubblegum family member 1 protein_coding Danio_rerio
ENSG00000103740 ACSBG1 acyl-CoA synthetase bubblegum family member 1 protein_coding Homo_sapiens

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