C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RNA binding protein with multiple splicing 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032387 Rbpms2 10090 + 9:65629648-65660528 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000055844 Rbpms2-201 65630582-65660505 protein_coding
  ENSMUST00000169003 Rbpms2-202 65629648-65660528 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000055844ENSMUST00000169003
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000055844 25.139±9.62 55.814±9.82 60.481±4.75 1.577±0.53 24.427±3.21 22.010±3.98 30.124±6.53 92.456±8.69 26.702±17.18 6.443±0.44 0.596±0.19 35.152±11.12 7.877±7.46 3.662±1.88
ENSMUST00000169003 N/A N/A N/A N/A 2.540±0.00 N/A 3.418±0.13 N/A N/A N/A 0.447±0.00 2.372±0.00 2.221±0.19 0.215±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RY CIL_0007RY_0002 VISTA 9:65081642-65684657
CIL_0008H0 CIL_0008H0_0002 VISTA 9:65525988-66127110
CIL_0003WW CIL_0003WW_0002 CGP 9:65629648-65690300

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045930 rbpms2a RNA binding protein with multiple splicing 2a protein_coding Danio_rerio
ENSDARG00000079578 rbpms2b RNA binding protein with multiple splicing 2b protein_coding Danio_rerio
ENSG00000166831 RBPMS2 RNA binding protein with multiple splicing 2 protein_coding Homo_sapiens

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