C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 25, member 38
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032519 Slc25a38 10090 + 9:120110374-120124504 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000035106 Slc25a38-001 120110374-120124504 protein_coding
  ENSMUST00000135514 Slc25a38-003 120114850-120122195 protein_coding
  ENSMUST00000137522 Slc25a38-007 120110408-120120305 processed_transcript
  ENSMUST00000139079 Slc25a38-002 120110408-120111597 processed_transcript
  ENSMUST00000144768 Slc25a38-006 120110424-120123651 nonsense_mediated_decay
  ENSMUST00000150093 Slc25a38-005 120110405-120120676 nonsense_mediated_decay
  ENSMUST00000154969 Slc25a38-004 120114989-120120280 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035106ENSMUST00000135514ENSMUST00000137522ENSMUST00000144768
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035106 5.470±1.86 8.190±1.78 5.006±1.98 7.185±3.43 4.965±2.26 7.967±0.93 7.659±0.28 10.823±1.03 22.200±17.61 5.000±0.65 6.152±0.62 7.142±2.03 10.899±5.18 6.657±3.03
ENSMUST00000135514 N/A N/A N/A N/A N/A N/A N/A N/A 26.251±4.98 N/A N/A N/A N/A 1.158±0.00
ENSMUST00000137522 N/A N/A N/A N/A 3.544±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144768 3.707±0.00 4.952±0.00 N/A 6.763±0.00 N/A N/A N/A N/A N/A N/A N/A 8.556±0.00 9.082±3.07 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000140 CIL_000140_0002 CGP 9:120092133-120124504
CIL_000146 CIL_000146_0002 CGP 9:120110374-120132369

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005743 IEA mitochondrial inner membrane
GO:0006810 IEA transport
GO:0016021 IEA integral component of membrane
GO:0030218 ISS erythrocyte differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059805 slc25a38a solute carrier family 25, member 38a protein_coding Danio_rerio
ENSDARG00000074533 slc25a38b solute carrier family 25, member 38b protein_coding Danio_rerio
ENSG00000144659 SLC25A38 solute carrier family 25, member 38 protein_coding Homo_sapiens

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