C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000140_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000179934-ENSG00000144659 CGP 9606 3:39329706-39397351
GeneTranscriptPositionBiotype
ENSG00000144659 (SLC25A38)
solute carrier family 25, member 38 		ENST00000273158 (SLC25A38-001) 39383348-39397351 protein_coding
ENST00000431510 (SLC25A38-002) 39383389-39391620 protein_coding
ENSG00000179934 (CCR8)
chemokine (C-C motif) receptor 8 		ENST00000326306 (CCR8-001) 39329706-39333446 protein_coding
ENST00000414803 (CCR8-002) 39329773-39333511 protein_coding
ENSG00000223668 (EEF1A1P24)
eukaryotic translation elongation factor 1 alpha 1 pseudogene 24 		ENST00000451469 (EEF1A1P24-001) 39358545-39359922 processed_pseudogene
ENSG00000228168 (HNRNPA1P21)
heterogeneous nuclear ribonucleoprotein A1 pseudogene 21 		ENST00000424115 (HNRNPA1P21-001) 39334979-39335939 processed_pseudogene
ENSG00000238267 (RP11-241K18.2)
 ENST00000435940 (RP11-241K18.2-001) 39338129-39338879 processed_pseudogene
CIL_000140_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000042262-ENSMUSG00000032519 CGP 10090 9:120092133-120124504
GeneTranscriptPositionBiotype
ENSMUSG00000032519 (Slc25a38)
solute carrier family 25, member 38 		ENSMUST00000035106 (Slc25a38-001) 120110374-120124504 protein_coding
ENSMUST00000135514 (Slc25a38-003) 120114850-120122195 protein_coding
ENSMUST00000137522 (Slc25a38-007) 120110408-120120305 processed_transcript
ENSMUST00000139079 (Slc25a38-002) 120110408-120111597 processed_transcript
ENSMUST00000144768 (Slc25a38-006) 120110424-120123651 nonsense_mediated_decay
ENSMUST00000150093 (Slc25a38-005) 120110405-120120676 nonsense_mediated_decay
ENSMUST00000154969 (Slc25a38-004) 120114989-120120280 processed_transcript
ENSMUSG00000042262 (Ccr8)
chemokine (C-C motif) receptor 8 		ENSMUST00000048777 (Ccr8-201) 120092133-120094906 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000140_0001ENSG00000144659ENST00000273158ENST00000431510ENSG00000179934ENST00000326306ENST00000414803ENSG00000223668ENST00000451469ENSG00000228168ENST00000424115ENSG00000238267ENST00000435940CIL_000140_0002ENSMUSG00000032519ENSMUST00000035106ENSMUST00000135514ENSMUST00000137522ENSMUST00000139079ENSMUST00000144768ENSMUST00000150093ENSMUST00000154969ENSMUSG00000042262ENSMUST00000048777
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000140_0001ENSG00000144659ENST00000273158ENST00000431510ENSG00000179934ENST00000326306ENST00000414803ENSG00000223668ENST00000451469ENSG00000228168ENST00000424115ENSG00000238267ENST00000435940CIL_000140_0002ENSMUSG00000032519ENSMUST00000035106ENSMUST00000135514ENSMUST00000137522ENSMUST00000144768ENSMUSG00000042262ENSMUST00000048777
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000144659 ENST00000273158 N/A 13.574±0.00 1.829±0.00 7.417±2.41 5.001±2.87 12.718±0.00 1.341±0.00 13.369±0.00 1.558±0.64 4.215±0.00 3.931±1.37 14.307±3.89 11.128±2.14 14.222±2.79
ENST00000431510 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.226±0.00 N/A N/A N/A
ENSG00000179934 ENST00000326306 N/A N/A N/A N/A 0.500±0.00 0.162±0.00 N/A N/A N/A N/A N/A 0.177±0.00 N/A 0.110±0.00
ENST00000414803 0.059±0.00 0.096±0.00 N/A N/A 0.036±0.00 0.088±0.00 N/A 0.214±0.00 N/A 0.153±0.08 N/A 0.037±0.02 0.037±0.00 N/A
ENSG00000223668 ENST00000451469 0.658±0.00 0.726±0.00 N/A 0.228±0.00 0.658±0.00 0.707±0.00 0.051±0.00 0.441±0.00 0.042±0.00 0.301±0.00 0.181±0.00 0.138±0.04 0.042±0.01 0.305±0.24
ENSG00000228168 ENST00000424115 0.782±0.00 1.277±0.00 0.240±0.00 0.236±0.00 0.285±0.15 0.534±0.00 0.184±0.00 0.292±0.00 0.096±0.02 0.629±0.00 0.166±0.00 0.293±0.28 0.122±0.00 0.195±0.14
ENSG00000238267 ENST00000435940 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.075±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032519 ENSMUST00000035106 5.470±1.86 8.190±1.78 5.006±1.98 7.185±3.43 4.965±2.26 7.967±0.93 7.659±0.28 10.823±1.03 22.200±17.61 5.000±0.65 6.152±0.62 7.142±2.03 10.899±5.18 6.657±3.03
ENSMUST00000135514 N/A N/A N/A N/A N/A N/A N/A N/A 26.251±4.98 N/A N/A N/A N/A 1.158±0.00
ENSMUST00000137522 N/A N/A N/A N/A 3.544±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139079 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144768 3.707±0.00 4.952±0.00 N/A 6.763±0.00 N/A N/A N/A N/A N/A N/A N/A 8.556±0.00 9.082±3.07 N/A
ENSMUST00000150093 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154969 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000042262 ENSMUST00000048777 0.078±0.04 0.047±0.00 0.039±0.02 0.042±0.02 0.808±0.56 0.205±0.07 0.023±0.00 0.115±0.06 0.026±0.03 0.327±0.13 0.199±0.00 0.137±0.09 0.103±0.12 N/A

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